RNA–Protein interactions for RNA: ENST00000467867.1

PGAM1-202, Transcript of phosphoglycerate mutase 1, humanhuman

TSL 2

Gene PGAM1, Length 1,187 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1-202ENST00000467867 NISCHQ9Y2I1 1504 aa29.05■■■□□ 2.24
PGAM1-202ENST00000467867 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
PGAM1-202ENST00000467867 ABCC9O60706 1549 aa25.24■■□□□ 1.63
PGAM1-202ENST00000467867 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
PGAM1-202ENST00000467867 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
PGAM1-202ENST00000467867 NACADO15069 1562 aa24.3■■□□□ 1.48
PGAM1-202ENST00000467867 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
PGAM1-202ENST00000467867 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
PGAM1-202ENST00000467867 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
PGAM1-202ENST00000467867 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
PGAM1-202ENST00000467867 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
PGAM1-202ENST00000467867 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
PGAM1-202ENST00000467867 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
PGAM1-202ENST00000467867 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
PGAM1-202ENST00000467867 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
PGAM1-202ENST00000467867 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
PGAM1-202ENST00000467867 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
PGAM1-202ENST00000467867 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
PGAM1-202ENST00000467867 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
PGAM1-202ENST00000467867 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
PGAM1-202ENST00000467867 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
PGAM1-202ENST00000467867 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
PGAM1-202ENST00000467867 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
PGAM1-202ENST00000467867 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
PGAM1-202ENST00000467867 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
PGAM1-202ENST00000467867 HMGXB3Q12766 1538 aa22.27■■□□□ 1.16
PGAM1-202ENST00000467867 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
PGAM1-202ENST00000467867 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
PGAM1-202ENST00000467867 WIZO95785 1651 aa22.07■■□□□ 1.12
PGAM1-202ENST00000467867 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
PGAM1-202ENST00000467867 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
PGAM1-202ENST00000467867 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
PGAM1-202ENST00000467867 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
PGAM1-202ENST00000467867 NESP48681 1621 aa21.8■■□□□ 1.08
PGAM1-202ENST00000467867 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
PGAM1-202ENST00000467867 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
PGAM1-202ENST00000467867 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
PGAM1-202ENST00000467867 CFTRP13569 1480 aa21.64■■□□□ 1.06
PGAM1-202ENST00000467867 CUX2O14529 1486 aa21.57■■□□□ 1.04
PGAM1-202ENST00000467867 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
PGAM1-202ENST00000467867 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
PGAM1-202ENST00000467867 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
PGAM1-202ENST00000467867 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
PGAM1-202ENST00000467867 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
PGAM1-202ENST00000467867 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
PGAM1-202ENST00000467867 WDR62O43379 1518 aa21.33■■□□□ 1
PGAM1-202ENST00000467867 ABCC8Q09428 1581 aa21.27■■□□□ 1
PGAM1-202ENST00000467867 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
PGAM1-202ENST00000467867 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
PGAM1-202ENST00000467867 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
PGAM1-202ENST00000467867 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
PGAM1-202ENST00000467867 SOGA1O94964 1423 aa20.97■□□□□ 0.95
PGAM1-202ENST00000467867 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
PGAM1-202ENST00000467867 CUX1P39880 1505 aa20.96■□□□□ 0.95
PGAM1-202ENST00000467867 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
PGAM1-202ENST00000467867 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
PGAM1-202ENST00000467867 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
PGAM1-202ENST00000467867 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
PGAM1-202ENST00000467867 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
PGAM1-202ENST00000467867 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
PGAM1-202ENST00000467867 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
PGAM1-202ENST00000467867 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.923e-7■■■■□ 23.7
PGAM1-202ENST00000467867 OSCARQ8IYS5 282 aa20.81■□□□□ 0.92
PGAM1-202ENST00000467867 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
PGAM1-202ENST00000467867 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
PGAM1-202ENST00000467867 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
PGAM1-202ENST00000467867 BIVM-ERCC5R4GMW8 1640 aa20.76■□□□□ 0.91
PGAM1-202ENST00000467867 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
PGAM1-202ENST00000467867 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
PGAM1-202ENST00000467867 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
PGAM1-202ENST00000467867 FBLN2P98095 1184 aa20.7■□□□□ 0.9
PGAM1-202ENST00000467867 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
PGAM1-202ENST00000467867 CHMP7Q8WUX9 453 aaPredicted RBP20.66■□□□□ 0.9
PGAM1-202ENST00000467867 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
PGAM1-202ENST00000467867 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
PGAM1-202ENST00000467867 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
PGAM1-202ENST00000467867 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
PGAM1-202ENST00000467867 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
PGAM1-202ENST00000467867 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
PGAM1-202ENST00000467867 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
PGAM1-202ENST00000467867 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
PGAM1-202ENST00000467867 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
PGAM1-202ENST00000467867 CHD1O14646 1710 aa20.47■□□□□ 0.87
PGAM1-202ENST00000467867 IGF1RP08069 1367 aa20.42■□□□□ 0.86
PGAM1-202ENST00000467867 GRIN2AQ12879 1464 aa20.39■□□□□ 0.85
PGAM1-202ENST00000467867 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PGAM1-202ENST00000467867 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
PGAM1-202ENST00000467867 NUP160Q12769 1436 aa20.3■□□□□ 0.84
PGAM1-202ENST00000467867 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
PGAM1-202ENST00000467867 CUL7Q14999 1698 aa20.29■□□□□ 0.84
PGAM1-202ENST00000467867 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
PGAM1-202ENST00000467867 RIMBP3CA6NJZ7 1639 aa20.25■□□□□ 0.83
PGAM1-202ENST00000467867 RIMBP3BA6NNM3 1639 aa20.25■□□□□ 0.83
PGAM1-202ENST00000467867 RIMBP3Q9UFD9 1639 aa20.25■□□□□ 0.83
PGAM1-202ENST00000467867 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
PGAM1-202ENST00000467867 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
PGAM1-202ENST00000467867 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
PGAM1-202ENST00000467867 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
PGAM1-202ENST00000467867 JPH4Q96JJ6 628 aa20.21■□□□□ 0.83
PGAM1-202ENST00000467867 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms