RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
PABPC1-209ENST00000519100 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
PABPC1-209ENST00000519100 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-209ENST00000519100 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-209ENST00000519100 FOXD1Q16676 465 aa15.55■□□□□ 0.08
PABPC1-209ENST00000519100 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
PABPC1-209ENST00000519100 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
PABPC1-209ENST00000519100 MSH5O43196 834 aa14.54□□□□□ -0.08
PABPC1-209ENST00000519100 PIAS4Q8N2W9 510 aaPredicted RBP14.53□□□□□ -0.08
PABPC1-209ENST00000519100 ADRA2BP18089 450 aa14.52□□□□□ -0.09
PABPC1-209ENST00000519100 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
PABPC1-209ENST00000519100 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-209ENST00000519100 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
PABPC1-209ENST00000519100 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
PABPC1-209ENST00000519100 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
PABPC1-209ENST00000519100 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
PABPC1-209ENST00000519100 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-209ENST00000519100 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
PABPC1-209ENST00000519100 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-209ENST00000519100 KCNA4P22459 653 aa12.59□□□□□ -0.39
PABPC1-209ENST00000519100 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
PABPC1-209ENST00000519100 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-209ENST00000519100 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
PABPC1-209ENST00000519100 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
PABPC1-209ENST00000519100 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
PABPC1-209ENST00000519100 C1QBPQ07021 282 aaKnown RBP12.23□□□□□ -0.45
PABPC1-209ENST00000519100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
PABPC1-209ENST00000519100 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-209ENST00000519100 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
PABPC1-209ENST00000519100 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
PABPC1-209ENST00000519100 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-209ENST00000519100 CAPN15O75808 1086 aa11.71□□□□□ -0.53
PABPC1-209ENST00000519100 ZBTB22O15209 634 aa11.67□□□□□ -0.54
PABPC1-209ENST00000519100 DSG3P32926 999 aa11.63□□□□□ -0.55
PABPC1-209ENST00000519100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-209ENST00000519100 APLP2Q06481 763 aa11.56□□□□□ -0.56
PABPC1-209ENST00000519100 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
PABPC1-209ENST00000519100 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-209ENST00000519100 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
PABPC1-209ENST00000519100 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-209ENST00000519100 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
PABPC1-209ENST00000519100 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-209ENST00000519100 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
PABPC1-209ENST00000519100 ABCB7O75027 752 aa11.44□□□□□ -0.58
PABPC1-209ENST00000519100 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-209ENST00000519100 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-209ENST00000519100 POLA2Q14181 598 aa11.23□□□□□ -0.61
PABPC1-209ENST00000519100 POTEHQ6S545 545 aa11.1□□□□□ -0.63
PABPC1-209ENST00000519100 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
PABPC1-209ENST00000519100 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
PABPC1-209ENST00000519100 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-209ENST00000519100 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
PABPC1-209ENST00000519100 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
PABPC1-209ENST00000519100 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
PABPC1-209ENST00000519100 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
PABPC1-209ENST00000519100 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
PABPC1-209ENST00000519100 FBLN2P98095 1184 aa10.73□□□□□ -0.69
PABPC1-209ENST00000519100 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
PABPC1-209ENST00000519100 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
PABPC1-209ENST00000519100 SPDYE2Q495Y8 402 aa10.65□□□□□ -0.7
PABPC1-209ENST00000519100 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
PABPC1-209ENST00000519100 PIP4P2Q8N4L2 257 aa10.6□□□□□ -0.71
PABPC1-209ENST00000519100 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-209ENST00000519100 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
PABPC1-209ENST00000519100 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
PABPC1-209ENST00000519100 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
PABPC1-209ENST00000519100 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
PABPC1-209ENST00000519100 SP7Q8TDD2 431 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-209ENST00000519100 HAX1O00165 279 aa10.41□□□□□ -0.74
PABPC1-209ENST00000519100 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
PABPC1-209ENST00000519100 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
PABPC1-209ENST00000519100 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
PABPC1-209ENST00000519100 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
PABPC1-209ENST00000519100 FKBP8Q14318 412 aa10.29□□□□□ -0.76
PABPC1-209ENST00000519100 EVX2Q03828 476 aa10.28□□□□□ -0.76
PABPC1-209ENST00000519100 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
PABPC1-209ENST00000519100 PROM2Q8N271 834 aa10.24□□□□□ -0.77
PABPC1-209ENST00000519100 C19orf67A6NJJ6 358 aa10.2□□□□□ -0.78
PABPC1-209ENST00000519100 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
PABPC1-209ENST00000519100 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
PABPC1-209ENST00000519100 GABBR2O75899 941 aa10.05□□□□□ -0.8
PABPC1-209ENST00000519100 CD44P16070 742 aaKnown RBP10.03□□□□□ -0.8
PABPC1-209ENST00000519100 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
PABPC1-209ENST00000519100 ZRANB1Q9UGI0 708 aa9.9□□□□□ -0.82
PABPC1-209ENST00000519100 CLCN6P51797 869 aa9.88□□□□□ -0.83
PABPC1-209ENST00000519100 ZNF579Q8NAF0 562 aaKnown RBP9.87□□□□□ -0.83
PABPC1-209ENST00000519100 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
PABPC1-209ENST00000519100 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
PABPC1-209ENST00000519100 POTEIP0CG38 1075 aa9.83□□□□□ -0.84
PABPC1-209ENST00000519100 FBXO3Q9UK99 471 aa9.82□□□□□ -0.84
PABPC1-209ENST00000519100 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
PABPC1-209ENST00000519100 VASPP50552 380 aaPredicted RBP9.81□□□□□ -0.84
PABPC1-209ENST00000519100 LHX8Q68G74 356 aa9.78□□□□□ -0.84
PABPC1-209ENST00000519100 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
PABPC1-209ENST00000519100 GALR2O43603 387 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-209ENST00000519100 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
PABPC1-209ENST00000519100 MIER1Q8N108 512 aa9.74□□□□□ -0.85
PABPC1-209ENST00000519100 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-209ENST00000519100 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
PABPC1-209ENST00000519100 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms