Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB6Q9Y5F9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB6Q9Y5F9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB6Q9Y5F9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB6Q9Y5F9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB6Q9Y5F9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGB6Q9Y5F9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDHGB6Q9Y5F9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PCDHGB6Q9Y5F9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB6Q9Y5F9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB6Q9Y5F9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGB6Q9Y5F9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.33■■□□□ 1.32
PCDHGB6Q9Y5F9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDHGB6Q9Y5F9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGB6Q9Y5F9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGB6Q9Y5F9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PCDHGB6Q9Y5F9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB6Q9Y5F9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGB6Q9Y5F9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHGB6Q9Y5F9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 ABHD17AP5-201ENST00000580133 923 ntBASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 AC022413.1-201ENST00000624602 984 ntBASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDHGB6Q9Y5F9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGB6Q9Y5F9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB6Q9Y5F9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
PCDHGB6Q9Y5F9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB6Q9Y5F9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB6Q9Y5F9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB6Q9Y5F9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGB6Q9Y5F9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGB6Q9Y5F9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB6Q9Y5F9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGB6Q9Y5F9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGB6Q9Y5F9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGB6Q9Y5F9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGB6Q9Y5F9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB6Q9Y5F9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGB6Q9Y5F9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGB6Q9Y5F9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHGB6Q9Y5F9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB6Q9Y5F9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PCDHGB6Q9Y5F9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGB6Q9Y5F9 DRD5P2-201ENST00000421395 2012 ntBASIC23.23■■□□□ 1.31
PCDHGB6Q9Y5F9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGB6Q9Y5F9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGB6Q9Y5F9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDHGB6Q9Y5F9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGB6Q9Y5F9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHGB6Q9Y5F9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGB6Q9Y5F9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGB6Q9Y5F9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.21■■□□□ 1.31
PCDHGB6Q9Y5F9 MIR219A2-201ENST00000608502 1504 ntBASIC23.21■■□□□ 1.31
PCDHGB6Q9Y5F9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms