Protein–RNA interactions for Protein: Q9ULD8

KCNH3, Potassium voltage-gated channel subfamily H member 3, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH3Q9ULD8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNH3Q9ULD8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNH3Q9ULD8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNH3Q9ULD8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.24■■■□□ 2.11
KCNH3Q9ULD8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNH3Q9ULD8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNH3Q9ULD8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNH3Q9ULD8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.24■■■□□ 2.11
KCNH3Q9ULD8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
KCNH3Q9ULD8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.23■■■□□ 2.11
KCNH3Q9ULD8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.23■■■□□ 2.11
KCNH3Q9ULD8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.22■■■□□ 2.11
KCNH3Q9ULD8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
KCNH3Q9ULD8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
KCNH3Q9ULD8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.22■■■□□ 2.11
KCNH3Q9ULD8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.21■■■□□ 2.11
KCNH3Q9ULD8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
KCNH3Q9ULD8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
KCNH3Q9ULD8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNH3Q9ULD8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
KCNH3Q9ULD8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.2■■■□□ 2.11
KCNH3Q9ULD8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.2■■■□□ 2.11
KCNH3Q9ULD8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
KCNH3Q9ULD8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
KCNH3Q9ULD8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
KCNH3Q9ULD8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.2■■■□□ 2.1
KCNH3Q9ULD8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
KCNH3Q9ULD8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
KCNH3Q9ULD8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
KCNH3Q9ULD8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNH3Q9ULD8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
KCNH3Q9ULD8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNH3Q9ULD8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
KCNH3Q9ULD8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
KCNH3Q9ULD8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
KCNH3Q9ULD8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.18■■■□□ 2.1
KCNH3Q9ULD8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNH3Q9ULD8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNH3Q9ULD8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KCNH3Q9ULD8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KCNH3Q9ULD8 AL449106.1-201ENST00000608517 1980 ntBASIC28.16■■■□□ 2.1
KCNH3Q9ULD8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.15■■■□□ 2.1
KCNH3Q9ULD8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
KCNH3Q9ULD8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
KCNH3Q9ULD8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.15■■■□□ 2.1
KCNH3Q9ULD8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNH3Q9ULD8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNH3Q9ULD8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.14■■■□□ 2.1
KCNH3Q9ULD8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNH3Q9ULD8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.13■■■□□ 2.09
KCNH3Q9ULD8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KCNH3Q9ULD8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNH3Q9ULD8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNH3Q9ULD8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
KCNH3Q9ULD8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
KCNH3Q9ULD8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
KCNH3Q9ULD8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.1■■■□□ 2.09
KCNH3Q9ULD8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.1■■■□□ 2.09
KCNH3Q9ULD8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.1■■■□□ 2.09
KCNH3Q9ULD8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.1■■■□□ 2.09
KCNH3Q9ULD8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
KCNH3Q9ULD8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
KCNH3Q9ULD8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.08■■■□□ 2.09
KCNH3Q9ULD8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
KCNH3Q9ULD8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.08■■■□□ 2.09
KCNH3Q9ULD8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.08■■■□□ 2.09
KCNH3Q9ULD8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
KCNH3Q9ULD8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
KCNH3Q9ULD8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.07■■■□□ 2.08
KCNH3Q9ULD8 AC091060.1-201ENST00000623524 1766 ntBASIC28.07■■■□□ 2.08
KCNH3Q9ULD8 AP004609.3-201ENST00000610705 1884 ntBASIC28.07■■■□□ 2.08
KCNH3Q9ULD8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.07■■■□□ 2.08
KCNH3Q9ULD8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.06■■■□□ 2.08
KCNH3Q9ULD8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.06■■■□□ 2.08
KCNH3Q9ULD8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
KCNH3Q9ULD8 LINC01971-201ENST00000617888 1048 ntBASIC28.05■■■□□ 2.08
KCNH3Q9ULD8 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.05■■■□□ 2.08
KCNH3Q9ULD8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
KCNH3Q9ULD8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
KCNH3Q9ULD8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.03■■■□□ 2.08
KCNH3Q9ULD8 WHAMMP3-201ENST00000611636 1609 ntBASIC28.03■■■□□ 2.08
KCNH3Q9ULD8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
KCNH3Q9ULD8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.02■■■□□ 2.08
KCNH3Q9ULD8 MIR639-201ENST00000384974 98 ntBASIC28.01■■■□□ 2.07
KCNH3Q9ULD8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
KCNH3Q9ULD8 MIR4449-201ENST00000578365 66 ntBASIC28■■■□□ 2.07
KCNH3Q9ULD8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
KCNH3Q9ULD8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
KCNH3Q9ULD8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
KCNH3Q9ULD8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.97■■■□□ 2.07
KCNH3Q9ULD8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
KCNH3Q9ULD8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
KCNH3Q9ULD8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 DUX4L13-201ENST00000554103 1267 ntBASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 DUX4L15-201ENST00000611059 1267 ntBASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 DUX4L23-201ENST00000615195 1269 ntBASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 DUX4L24-201ENST00000617576 1269 ntBASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 DUX4L22-201ENST00000618238 1269 ntBASIC27.96■■■□□ 2.07
KCNH3Q9ULD8 DUX4L20-201ENST00000619712 1269 ntBASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms