Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.07■■□□□ 1.44
TUBB1Q9H4B7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TUBB1Q9H4B7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.07■■□□□ 1.44
TUBB1Q9H4B7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TUBB1Q9H4B7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
TUBB1Q9H4B7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TUBB1Q9H4B7 AC044849.2-201ENST00000606596 710 ntBASIC24.06■■□□□ 1.44
TUBB1Q9H4B7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TUBB1Q9H4B7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TUBB1Q9H4B7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
TUBB1Q9H4B7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TUBB1Q9H4B7 AP004609.3-201ENST00000610705 1884 ntBASIC24.04■■□□□ 1.44
TUBB1Q9H4B7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TUBB1Q9H4B7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.04■■□□□ 1.44
TUBB1Q9H4B7 AC135731.1-201ENST00000569415 2548 ntBASIC24.04■■□□□ 1.44
TUBB1Q9H4B7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 AC145676.1-201ENST00000514988 2004 ntBASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.03■■□□□ 1.44
TUBB1Q9H4B7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TUBB1Q9H4B7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TUBB1Q9H4B7 AC021231.2-201ENST00000594613 730 ntBASIC24.02■■□□□ 1.44
TUBB1Q9H4B7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.02■■□□□ 1.44
TUBB1Q9H4B7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.02■■□□□ 1.44
TUBB1Q9H4B7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TUBB1Q9H4B7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TUBB1Q9H4B7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TUBB1Q9H4B7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TUBB1Q9H4B7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.01■■□□□ 1.43
TUBB1Q9H4B7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TUBB1Q9H4B7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24■■□□□ 1.43
TUBB1Q9H4B7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24■■□□□ 1.43
TUBB1Q9H4B7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24■■□□□ 1.43
TUBB1Q9H4B7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
TUBB1Q9H4B7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.99■■□□□ 1.43
TUBB1Q9H4B7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TUBB1Q9H4B7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TUBB1Q9H4B7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TUBB1Q9H4B7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
TUBB1Q9H4B7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TUBB1Q9H4B7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
TUBB1Q9H4B7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.98■■□□□ 1.43
TUBB1Q9H4B7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TUBB1Q9H4B7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TUBB1Q9H4B7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TUBB1Q9H4B7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.97■■□□□ 1.43
TUBB1Q9H4B7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TUBB1Q9H4B7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TUBB1Q9H4B7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
TUBB1Q9H4B7 AC092803.2-201ENST00000564287 1899 ntBASIC23.94■■□□□ 1.42
TUBB1Q9H4B7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TUBB1Q9H4B7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.94■■□□□ 1.42
TUBB1Q9H4B7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TUBB1Q9H4B7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBB1Q9H4B7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBB1Q9H4B7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBB1Q9H4B7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBB1Q9H4B7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBB1Q9H4B7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.93■■□□□ 1.42
TUBB1Q9H4B7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 WHAMMP3-201ENST00000611636 1609 ntBASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 DUSP8P4-201ENST00000399538 1761 ntBASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 AC142472.1-201ENST00000612013 1741 ntBASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TUBB1Q9H4B7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.91■■□□□ 1.42
TUBB1Q9H4B7 DUX4L29-201ENST00000425409 679 ntBASIC23.91■■□□□ 1.42
TUBB1Q9H4B7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TUBB1Q9H4B7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TUBB1Q9H4B7 AC020928.2-201ENST00000588717 2197 ntBASIC23.91■■□□□ 1.42
TUBB1Q9H4B7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TUBB1Q9H4B7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TUBB1Q9H4B7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TUBB1Q9H4B7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.9■■□□□ 1.42
TUBB1Q9H4B7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TUBB1Q9H4B7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TUBB1Q9H4B7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TUBB1Q9H4B7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TUBB1Q9H4B7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.89■■□□□ 1.42
TUBB1Q9H4B7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TUBB1Q9H4B7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.89■■□□□ 1.41
TUBB1Q9H4B7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TUBB1Q9H4B7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TUBB1Q9H4B7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TUBB1Q9H4B7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TUBB1Q9H4B7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.88■■□□□ 1.41
TUBB1Q9H4B7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TUBB1Q9H4B7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.88■■□□□ 1.41
TUBB1Q9H4B7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.87■■□□□ 1.41
TUBB1Q9H4B7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TUBB1Q9H4B7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TUBB1Q9H4B7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TUBB1Q9H4B7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TUBB1Q9H4B7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TUBB1Q9H4B7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms