Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC110285.7-201ENST00000624417 1536 ntBASIC27.35■■□□□ 1.97
VPS16Q9H269 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS16Q9H269 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS16Q9H269 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
VPS16Q9H269 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS16Q9H269 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.33■■□□□ 1.97
VPS16Q9H269 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
VPS16Q9H269 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS16Q9H269 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
VPS16Q9H269 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.31■■□□□ 1.96
VPS16Q9H269 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.31■■□□□ 1.96
VPS16Q9H269 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
VPS16Q9H269 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VPS16Q9H269 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
VPS16Q9H269 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
VPS16Q9H269 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
VPS16Q9H269 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.29■■□□□ 1.96
VPS16Q9H269 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
VPS16Q9H269 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
VPS16Q9H269 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
VPS16Q9H269 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VPS16Q9H269 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VPS16Q9H269 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VPS16Q9H269 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.28■■□□□ 1.96
VPS16Q9H269 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.28■■□□□ 1.96
VPS16Q9H269 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
VPS16Q9H269 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VPS16Q9H269 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.28■■□□□ 1.96
VPS16Q9H269 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS16Q9H269 AP004609.3-201ENST00000610705 1884 ntBASIC27.27■■□□□ 1.96
VPS16Q9H269 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.27■■□□□ 1.96
VPS16Q9H269 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.96
VPS16Q9H269 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
VPS16Q9H269 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
VPS16Q9H269 AC021231.2-201ENST00000594613 730 ntBASIC27.26■■□□□ 1.95
VPS16Q9H269 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
VPS16Q9H269 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
VPS16Q9H269 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.25■■□□□ 1.95
VPS16Q9H269 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VPS16Q9H269 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VPS16Q9H269 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
VPS16Q9H269 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS16Q9H269 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
VPS16Q9H269 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
VPS16Q9H269 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.23■■□□□ 1.95
VPS16Q9H269 AC135731.1-201ENST00000569415 2548 ntBASIC27.23■■□□□ 1.95
VPS16Q9H269 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
VPS16Q9H269 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.22■■□□□ 1.95
VPS16Q9H269 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS16Q9H269 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS16Q9H269 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
VPS16Q9H269 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
VPS16Q9H269 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.21■■□□□ 1.95
VPS16Q9H269 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.21■■□□□ 1.95
VPS16Q9H269 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.21■■□□□ 1.95
VPS16Q9H269 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
VPS16Q9H269 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.2■■□□□ 1.94
VPS16Q9H269 AC145676.1-201ENST00000514988 2004 ntBASIC27.19■■□□□ 1.94
VPS16Q9H269 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
VPS16Q9H269 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
VPS16Q9H269 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.19■■□□□ 1.94
VPS16Q9H269 DUX4L29-201ENST00000425409 679 ntBASIC27.19■■□□□ 1.94
VPS16Q9H269 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
VPS16Q9H269 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
VPS16Q9H269 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
VPS16Q9H269 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
VPS16Q9H269 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
VPS16Q9H269 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
VPS16Q9H269 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
VPS16Q9H269 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
VPS16Q9H269 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.16■■□□□ 1.94
VPS16Q9H269 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
VPS16Q9H269 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
VPS16Q9H269 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
VPS16Q9H269 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
VPS16Q9H269 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
VPS16Q9H269 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS16Q9H269 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS16Q9H269 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS16Q9H269 WHAMMP3-201ENST00000611636 1609 ntBASIC27.12■■□□□ 1.93
VPS16Q9H269 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.12■■□□□ 1.93
VPS16Q9H269 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.12■■□□□ 1.93
VPS16Q9H269 AC092803.2-201ENST00000564287 1899 ntBASIC27.12■■□□□ 1.93
VPS16Q9H269 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.11■■□□□ 1.93
VPS16Q9H269 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS16Q9H269 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
VPS16Q9H269 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS16Q9H269 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.11■■□□□ 1.93
VPS16Q9H269 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS16Q9H269 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS16Q9H269 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS16Q9H269 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS16Q9H269 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.11■■□□□ 1.93
VPS16Q9H269 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
VPS16Q9H269 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS16Q9H269 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS16Q9H269 AC142472.1-201ENST00000612013 1741 ntBASIC27.09■■□□□ 1.93
VPS16Q9H269 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS16Q9H269 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.09■■□□□ 1.93
VPS16Q9H269 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms