Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.77■□□□□ 0.91
PCGF1Q9BSM1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PCGF1Q9BSM1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCGF1Q9BSM1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCGF1Q9BSM1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.76■□□□□ 0.91
PCGF1Q9BSM1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.76■□□□□ 0.91
PCGF1Q9BSM1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PCGF1Q9BSM1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF1Q9BSM1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF1Q9BSM1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF1Q9BSM1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF1Q9BSM1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 GPX1-201ENST00000419349 1106 ntBASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF1Q9BSM1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 AC148477.6-201ENST00000623746 465 ntBASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 MIR219A2-201ENST00000608502 1504 ntBASIC20.73■□□□□ 0.91
PCGF1Q9BSM1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCGF1Q9BSM1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF1Q9BSM1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF1Q9BSM1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF1Q9BSM1 AC022413.1-201ENST00000624602 984 ntBASIC20.71■□□□□ 0.91
PCGF1Q9BSM1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF1Q9BSM1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF1Q9BSM1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF1Q9BSM1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.7■□□□□ 0.9
PCGF1Q9BSM1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.7■□□□□ 0.9
PCGF1Q9BSM1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF1Q9BSM1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.7■□□□□ 0.9
PCGF1Q9BSM1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCGF1Q9BSM1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCGF1Q9BSM1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.69■□□□□ 0.9
PCGF1Q9BSM1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.69■□□□□ 0.9
PCGF1Q9BSM1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.69■□□□□ 0.9
PCGF1Q9BSM1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF1Q9BSM1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.68■□□□□ 0.9
PCGF1Q9BSM1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF1Q9BSM1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF1Q9BSM1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCGF1Q9BSM1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF1Q9BSM1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF1Q9BSM1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCGF1Q9BSM1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCGF1Q9BSM1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCGF1Q9BSM1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCGF1Q9BSM1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCGF1Q9BSM1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCGF1Q9BSM1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PCGF1Q9BSM1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCGF1Q9BSM1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
PCGF1Q9BSM1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCGF1Q9BSM1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PCGF1Q9BSM1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCGF1Q9BSM1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF1Q9BSM1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF1Q9BSM1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF1Q9BSM1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.64■□□□□ 0.89
PCGF1Q9BSM1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF1Q9BSM1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF1Q9BSM1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCGF1Q9BSM1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF1Q9BSM1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.63■□□□□ 0.89
PCGF1Q9BSM1 AP002414.2-202ENST00000590929 1450 ntBASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF1Q9BSM1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCGF1Q9BSM1 RARRES2P2-201ENST00000394842 485 ntBASIC20.61■□□□□ 0.89
PCGF1Q9BSM1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCGF1Q9BSM1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCGF1Q9BSM1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 RNF126P1-201ENST00000567452 1320 ntBASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCGF1Q9BSM1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms