Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.43■■□□□ 1.34
SIMC1Q8NDZ2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SIMC1Q8NDZ2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SIMC1Q8NDZ2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.42■■□□□ 1.34
SIMC1Q8NDZ2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.42■■□□□ 1.34
SIMC1Q8NDZ2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SIMC1Q8NDZ2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SIMC1Q8NDZ2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.41■■□□□ 1.34
SIMC1Q8NDZ2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SIMC1Q8NDZ2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SIMC1Q8NDZ2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SIMC1Q8NDZ2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.4■■□□□ 1.34
SIMC1Q8NDZ2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
SIMC1Q8NDZ2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SIMC1Q8NDZ2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SIMC1Q8NDZ2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
SIMC1Q8NDZ2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 AL121749.1-202ENST00000609313 2153 ntBASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SIMC1Q8NDZ2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
SIMC1Q8NDZ2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SIMC1Q8NDZ2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SIMC1Q8NDZ2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIMC1Q8NDZ2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SIMC1Q8NDZ2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SIMC1Q8NDZ2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIMC1Q8NDZ2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SIMC1Q8NDZ2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SIMC1Q8NDZ2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SIMC1Q8NDZ2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SIMC1Q8NDZ2 MIR219A2-201ENST00000608502 1504 ntBASIC23.33■■□□□ 1.32
SIMC1Q8NDZ2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIMC1Q8NDZ2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.32■■□□□ 1.32
SIMC1Q8NDZ2 AC008813.1-201ENST00000536597 885 ntBASIC23.32■■□□□ 1.32
SIMC1Q8NDZ2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SIMC1Q8NDZ2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.32■■□□□ 1.32
SIMC1Q8NDZ2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIMC1Q8NDZ2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SIMC1Q8NDZ2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
SIMC1Q8NDZ2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SIMC1Q8NDZ2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.3■■□□□ 1.32
SIMC1Q8NDZ2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
SIMC1Q8NDZ2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SIMC1Q8NDZ2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SIMC1Q8NDZ2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SIMC1Q8NDZ2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SIMC1Q8NDZ2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 MIR639-201ENST00000384974 98 ntBASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 AC148477.6-201ENST00000623746 465 ntBASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.28■■□□□ 1.32
SIMC1Q8NDZ2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SIMC1Q8NDZ2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIMC1Q8NDZ2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SIMC1Q8NDZ2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SIMC1Q8NDZ2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SIMC1Q8NDZ2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.27■■□□□ 1.32
SIMC1Q8NDZ2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 AL449106.1-201ENST00000608517 1980 ntBASIC23.26■■□□□ 1.31
SIMC1Q8NDZ2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms