Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SYNPOQ8N3V7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SYNPOQ8N3V7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SYNPOQ8N3V7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYNPOQ8N3V7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SYNPOQ8N3V7 DUX4L18-201ENST00000553347 1267 ntBASIC25.53■■□□□ 1.68
SYNPOQ8N3V7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.53■■□□□ 1.68
SYNPOQ8N3V7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SYNPOQ8N3V7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SYNPOQ8N3V7 AL359258.2-201ENST00000564063 1566 ntBASIC25.52■■□□□ 1.68
SYNPOQ8N3V7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SYNPOQ8N3V7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SYNPOQ8N3V7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 AC026202.3-201ENST00000600805 1127 ntBASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SYNPOQ8N3V7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYNPOQ8N3V7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYNPOQ8N3V7 AC025884.2-201ENST00000553429 711 ntBASIC25.5■■□□□ 1.67
SYNPOQ8N3V7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYNPOQ8N3V7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SYNPOQ8N3V7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.48■■□□□ 1.67
SYNPOQ8N3V7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SYNPOQ8N3V7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SYNPOQ8N3V7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.48■■□□□ 1.67
SYNPOQ8N3V7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SYNPOQ8N3V7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
SYNPOQ8N3V7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.47■■□□□ 1.67
SYNPOQ8N3V7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.47■■□□□ 1.67
SYNPOQ8N3V7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SYNPOQ8N3V7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.47■■□□□ 1.67
SYNPOQ8N3V7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 RP9P-202ENST00000450133 1212 ntBASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 AC074183.2-201ENST00000623112 922 ntBASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SYNPOQ8N3V7 AL035685.1-201ENST00000636663 812 ntBASIC25.45■■□□□ 1.66
SYNPOQ8N3V7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
SYNPOQ8N3V7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.45■■□□□ 1.66
SYNPOQ8N3V7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.44■■□□□ 1.66
SYNPOQ8N3V7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.44■■□□□ 1.66
SYNPOQ8N3V7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SYNPOQ8N3V7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYNPOQ8N3V7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYNPOQ8N3V7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SYNPOQ8N3V7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
SYNPOQ8N3V7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SYNPOQ8N3V7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SYNPOQ8N3V7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SYNPOQ8N3V7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.41■■□□□ 1.66
SYNPOQ8N3V7 ABCB10P3-201ENST00000561950 2166 ntBASIC25.41■■□□□ 1.66
SYNPOQ8N3V7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.41■■□□□ 1.66
SYNPOQ8N3V7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SYNPOQ8N3V7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SYNPOQ8N3V7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SYNPOQ8N3V7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 AC100797.4-201ENST00000631653 1827 ntBASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SYNPOQ8N3V7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 DUX4L9-201ENST00000449051 1259 ntBASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 AL451085.2-201ENST00000605085 799 ntBASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 RAP2CP1-202ENST00000605179 643 ntBASIC25.39■■□□□ 1.66
SYNPOQ8N3V7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SYNPOQ8N3V7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.39■■□□□ 1.65
SYNPOQ8N3V7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SYNPOQ8N3V7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SYNPOQ8N3V7 AC093536.1-201ENST00000569153 554 ntBASIC25.38■■□□□ 1.65
SYNPOQ8N3V7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.38■■□□□ 1.65
SYNPOQ8N3V7 ST7-AS1-201ENST00000456775 1889 ntBASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms