Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
DDX53Q86TM3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX53Q86TM3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX53Q86TM3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
DDX53Q86TM3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
DDX53Q86TM3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX53Q86TM3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX53Q86TM3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX53Q86TM3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
DDX53Q86TM3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX53Q86TM3 AL139393.2-201ENST00000608721 2025 ntBASIC26.73■■□□□ 1.87
DDX53Q86TM3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX53Q86TM3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX53Q86TM3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
DDX53Q86TM3 RARRES2P1-201ENST00000474487 481 ntBASIC26.72■■□□□ 1.87
DDX53Q86TM3 AC026202.3-201ENST00000600805 1127 ntBASIC26.72■■□□□ 1.87
DDX53Q86TM3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX53Q86TM3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
DDX53Q86TM3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX53Q86TM3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
DDX53Q86TM3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX53Q86TM3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
DDX53Q86TM3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
DDX53Q86TM3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX53Q86TM3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX53Q86TM3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.7■■□□□ 1.86
DDX53Q86TM3 DUX4L18-201ENST00000553347 1267 ntBASIC26.7■■□□□ 1.86
DDX53Q86TM3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.7■■□□□ 1.86
DDX53Q86TM3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.7■■□□□ 1.86
DDX53Q86TM3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.69■■□□□ 1.86
DDX53Q86TM3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
DDX53Q86TM3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX53Q86TM3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX53Q86TM3 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.68■■□□□ 1.86
DDX53Q86TM3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.68■■□□□ 1.86
DDX53Q86TM3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX53Q86TM3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX53Q86TM3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX53Q86TM3 ABCB10P3-201ENST00000561950 2166 ntBASIC26.68■■□□□ 1.86
DDX53Q86TM3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX53Q86TM3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX53Q86TM3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.67■■□□□ 1.86
DDX53Q86TM3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX53Q86TM3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.66■■□□□ 1.86
DDX53Q86TM3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX53Q86TM3 RP9P-202ENST00000450133 1212 ntBASIC26.66■■□□□ 1.86
DDX53Q86TM3 AP002414.2-202ENST00000590929 1450 ntBASIC26.66■■□□□ 1.86
DDX53Q86TM3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
DDX53Q86TM3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX53Q86TM3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX53Q86TM3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX53Q86TM3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX53Q86TM3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.64■■□□□ 1.86
DDX53Q86TM3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
DDX53Q86TM3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.64■■□□□ 1.86
DDX53Q86TM3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
DDX53Q86TM3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
DDX53Q86TM3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
DDX53Q86TM3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX53Q86TM3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX53Q86TM3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX53Q86TM3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
DDX53Q86TM3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.63■■□□□ 1.85
DDX53Q86TM3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.62■■□□□ 1.85
DDX53Q86TM3 AC093536.1-201ENST00000569153 554 ntBASIC26.62■■□□□ 1.85
DDX53Q86TM3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
DDX53Q86TM3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX53Q86TM3 RAP2CP1-202ENST00000605179 643 ntBASIC26.61■■□□□ 1.85
DDX53Q86TM3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX53Q86TM3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX53Q86TM3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX53Q86TM3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX53Q86TM3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.6■■□□□ 1.85
DDX53Q86TM3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX53Q86TM3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
DDX53Q86TM3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX53Q86TM3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
DDX53Q86TM3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.59■■□□□ 1.85
DDX53Q86TM3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX53Q86TM3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX53Q86TM3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX53Q86TM3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX53Q86TM3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX53Q86TM3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
DDX53Q86TM3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX53Q86TM3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.57■■□□□ 1.84
DDX53Q86TM3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
DDX53Q86TM3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX53Q86TM3 DUX4L9-201ENST00000449051 1259 ntBASIC26.57■■□□□ 1.84
DDX53Q86TM3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX53Q86TM3 MIR3960-201ENST00000583311 91 ntBASIC26.56■■□□□ 1.84
DDX53Q86TM3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
DDX53Q86TM3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
DDX53Q86TM3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX53Q86TM3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
DDX53Q86TM3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX53Q86TM3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX53Q86TM3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
DDX53Q86TM3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
DDX53Q86TM3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms