Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDKAL1Q5VV42 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CDKAL1Q5VV42 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDKAL1Q5VV42 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDKAL1Q5VV42 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CDKAL1Q5VV42 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.4■■□□□ 1.98
CDKAL1Q5VV42 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CDKAL1Q5VV42 AP004609.3-201ENST00000610705 1884 ntBASIC27.39■■□□□ 1.98
CDKAL1Q5VV42 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CDKAL1Q5VV42 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CDKAL1Q5VV42 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.38■■□□□ 1.97
CDKAL1Q5VV42 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDKAL1Q5VV42 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDKAL1Q5VV42 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDKAL1Q5VV42 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDKAL1Q5VV42 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CDKAL1Q5VV42 AC135731.1-201ENST00000569415 2548 ntBASIC27.35■■□□□ 1.97
CDKAL1Q5VV42 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.35■■□□□ 1.97
CDKAL1Q5VV42 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CDKAL1Q5VV42 AC044849.2-201ENST00000606596 710 ntBASIC27.35■■□□□ 1.97
CDKAL1Q5VV42 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.34■■□□□ 1.97
CDKAL1Q5VV42 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDKAL1Q5VV42 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CDKAL1Q5VV42 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDKAL1Q5VV42 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDKAL1Q5VV42 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDKAL1Q5VV42 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 DUSP8P4-201ENST00000399538 1761 ntBASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 AC092803.2-201ENST00000564287 1899 ntBASIC27.32■■□□□ 1.96
CDKAL1Q5VV42 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDKAL1Q5VV42 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDKAL1Q5VV42 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDKAL1Q5VV42 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.31■■□□□ 1.96
CDKAL1Q5VV42 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDKAL1Q5VV42 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDKAL1Q5VV42 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDKAL1Q5VV42 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CDKAL1Q5VV42 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.3■■□□□ 1.96
CDKAL1Q5VV42 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.3■■□□□ 1.96
CDKAL1Q5VV42 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDKAL1Q5VV42 AC021231.2-201ENST00000594613 730 ntBASIC27.29■■□□□ 1.96
CDKAL1Q5VV42 AC142472.1-201ENST00000612013 1741 ntBASIC27.29■■□□□ 1.96
CDKAL1Q5VV42 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDKAL1Q5VV42 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 WHAMMP3-201ENST00000611636 1609 ntBASIC27.27■■□□□ 1.96
CDKAL1Q5VV42 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDKAL1Q5VV42 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CDKAL1Q5VV42 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
CDKAL1Q5VV42 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.26■■□□□ 1.95
CDKAL1Q5VV42 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.26■■□□□ 1.95
CDKAL1Q5VV42 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CDKAL1Q5VV42 AC020928.2-201ENST00000588717 2197 ntBASIC27.25■■□□□ 1.95
CDKAL1Q5VV42 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDKAL1Q5VV42 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.25■■□□□ 1.95
CDKAL1Q5VV42 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDKAL1Q5VV42 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.24■■□□□ 1.95
CDKAL1Q5VV42 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDKAL1Q5VV42 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDKAL1Q5VV42 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDKAL1Q5VV42 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDKAL1Q5VV42 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDKAL1Q5VV42 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.23■■□□□ 1.95
CDKAL1Q5VV42 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDKAL1Q5VV42 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.22■■□□□ 1.95
CDKAL1Q5VV42 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDKAL1Q5VV42 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDKAL1Q5VV42 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDKAL1Q5VV42 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
CDKAL1Q5VV42 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDKAL1Q5VV42 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.19■■□□□ 1.94
CDKAL1Q5VV42 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.18■■□□□ 1.94
CDKAL1Q5VV42 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CDKAL1Q5VV42 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms