Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
PMS1P54277 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.53■■■□□ 2
PMS1P54277 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
PMS1P54277 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.52■■■□□ 2
PMS1P54277 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.52■■■□□ 2
PMS1P54277 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.52■■■□□ 2
PMS1P54277 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.51■■■□□ 2
PMS1P54277 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
PMS1P54277 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
PMS1P54277 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
PMS1P54277 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.5■■□□□ 1.99
PMS1P54277 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PMS1P54277 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.5■■□□□ 1.99
PMS1P54277 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PMS1P54277 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.49■■□□□ 1.99
PMS1P54277 LINC01971-201ENST00000617888 1048 ntBASIC27.49■■□□□ 1.99
PMS1P54277 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.49■■□□□ 1.99
PMS1P54277 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
PMS1P54277 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PMS1P54277 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PMS1P54277 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.47■■□□□ 1.99
PMS1P54277 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.47■■□□□ 1.99
PMS1P54277 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PMS1P54277 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PMS1P54277 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.46■■□□□ 1.99
PMS1P54277 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.46■■□□□ 1.99
PMS1P54277 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.46■■□□□ 1.99
PMS1P54277 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.45■■□□□ 1.98
PMS1P54277 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
PMS1P54277 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PMS1P54277 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
PMS1P54277 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.44■■□□□ 1.98
PMS1P54277 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
PMS1P54277 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.43■■□□□ 1.98
PMS1P54277 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PMS1P54277 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PMS1P54277 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.42■■□□□ 1.98
PMS1P54277 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
PMS1P54277 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L13-201ENST00000554103 1267 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L15-201ENST00000611059 1267 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L23-201ENST00000615195 1269 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L24-201ENST00000617576 1269 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L22-201ENST00000618238 1269 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L20-201ENST00000619712 1269 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L21-201ENST00000622058 1269 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L10-201ENST00000622460 1267 ntBASIC27.41■■□□□ 1.98
PMS1P54277 DUX4L25-201ENST00000624915 1269 ntBASIC27.41■■□□□ 1.98
PMS1P54277 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PMS1P54277 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
PMS1P54277 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PMS1P54277 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PMS1P54277 AP004609.3-201ENST00000610705 1884 ntBASIC27.4■■□□□ 1.98
PMS1P54277 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.4■■□□□ 1.98
PMS1P54277 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
PMS1P54277 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
PMS1P54277 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PMS1P54277 AC091060.1-201ENST00000623524 1766 ntBASIC27.39■■□□□ 1.98
PMS1P54277 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PMS1P54277 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PMS1P54277 DUX4L11-201ENST00000611504 1267 ntBASIC27.38■■□□□ 1.97
PMS1P54277 DUX4L12-201ENST00000614593 1267 ntBASIC27.38■■□□□ 1.97
PMS1P54277 DUX4L14-201ENST00000621227 1267 ntBASIC27.38■■□□□ 1.97
PMS1P54277 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.38■■□□□ 1.97
PMS1P54277 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.37■■□□□ 1.97
PMS1P54277 ZNRF2P2-203ENST00000454624 420 ntBASIC27.37■■□□□ 1.97
PMS1P54277 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
PMS1P54277 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PMS1P54277 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PMS1P54277 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PMS1P54277 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PMS1P54277 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
PMS1P54277 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.36■■□□□ 1.97
PMS1P54277 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.36■■□□□ 1.97
PMS1P54277 WHAMMP3-201ENST00000611636 1609 ntBASIC27.36■■□□□ 1.97
PMS1P54277 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PMS1P54277 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.35■■□□□ 1.97
PMS1P54277 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.35■■□□□ 1.97
PMS1P54277 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
PMS1P54277 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PMS1P54277 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
PMS1P54277 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PMS1P54277 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.32■■□□□ 1.96
PMS1P54277 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.32■■□□□ 1.96
PMS1P54277 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PMS1P54277 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
PMS1P54277 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.31■■□□□ 1.96
PMS1P54277 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PMS1P54277 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PMS1P54277 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PMS1P54277 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PMS1P54277 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PMS1P54277 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.29■■□□□ 1.96
PMS1P54277 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.29■■□□□ 1.96
PMS1P54277 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PMS1P54277 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.28■■□□□ 1.96
PMS1P54277 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.28■■□□□ 1.96
PMS1P54277 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PMS1P54277 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.28■■□□□ 1.96
PMS1P54277 AC142472.1-201ENST00000612013 1741 ntBASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms