Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.08■□□□□ 0.97
EFNA4P52798 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
EFNA4P52798 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.08■□□□□ 0.96
EFNA4P52798 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.07■□□□□ 0.96
EFNA4P52798 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.07■□□□□ 0.96
EFNA4P52798 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
EFNA4P52798 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.07■□□□□ 0.96
EFNA4P52798 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.06■□□□□ 0.96
EFNA4P52798 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.06■□□□□ 0.96
EFNA4P52798 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EFNA4P52798 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EFNA4P52798 AC133552.2-201ENST00000619106 1032 ntBASIC21.06■□□□□ 0.96
EFNA4P52798 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNA4P52798 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EFNA4P52798 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EFNA4P52798 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNA4P52798 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNA4P52798 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNA4P52798 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.05■□□□□ 0.96
EFNA4P52798 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.05■□□□□ 0.96
EFNA4P52798 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFNA4P52798 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.05■□□□□ 0.96
EFNA4P52798 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.05■□□□□ 0.96
EFNA4P52798 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.04■□□□□ 0.96
EFNA4P52798 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
EFNA4P52798 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNA4P52798 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EFNA4P52798 AC009831.1-201ENST00000580420 1582 ntBASIC21.03■□□□□ 0.96
EFNA4P52798 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.03■□□□□ 0.96
EFNA4P52798 AC025884.2-201ENST00000553429 711 ntBASIC21.03■□□□□ 0.96
EFNA4P52798 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFNA4P52798 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.03■□□□□ 0.96
EFNA4P52798 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.02■□□□□ 0.96
EFNA4P52798 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
EFNA4P52798 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
EFNA4P52798 AL592293.1-201ENST00000502889 1188 ntBASIC21.01■□□□□ 0.95
EFNA4P52798 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.01■□□□□ 0.95
EFNA4P52798 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA4P52798 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA4P52798 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFNA4P52798 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
EFNA4P52798 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EFNA4P52798 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21■□□□□ 0.95
EFNA4P52798 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21■□□□□ 0.95
EFNA4P52798 RP9P-202ENST00000450133 1212 ntBASIC21■□□□□ 0.95
EFNA4P52798 HES4-204ENST00000484667 667 ntTSL 3 BASIC21■□□□□ 0.95
EFNA4P52798 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EFNA4P52798 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EFNA4P52798 AC129492.7-201ENST00000622992 756 ntBASIC21■□□□□ 0.95
EFNA4P52798 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21■□□□□ 0.95
EFNA4P52798 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA4P52798 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA4P52798 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA4P52798 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA4P52798 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA4P52798 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNA4P52798 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
EFNA4P52798 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.99■□□□□ 0.95
EFNA4P52798 AC026202.3-201ENST00000600805 1127 ntBASIC20.99■□□□□ 0.95
EFNA4P52798 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA4P52798 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA4P52798 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFNA4P52798 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA4P52798 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA4P52798 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EFNA4P52798 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA4P52798 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
EFNA4P52798 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.97■□□□□ 0.95
EFNA4P52798 ABCB10P1-201ENST00000614297 2181 ntBASIC20.97■□□□□ 0.95
EFNA4P52798 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNA4P52798 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EFNA4P52798 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA4P52798 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA4P52798 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.96■□□□□ 0.95
EFNA4P52798 MIR3960-201ENST00000583311 91 ntBASIC20.96■□□□□ 0.95
EFNA4P52798 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNA4P52798 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA4P52798 AC093536.1-201ENST00000569153 554 ntBASIC20.95■□□□□ 0.94
EFNA4P52798 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNA4P52798 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.95■□□□□ 0.94
EFNA4P52798 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.95■□□□□ 0.94
EFNA4P52798 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
EFNA4P52798 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA4P52798 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA4P52798 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFNA4P52798 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
EFNA4P52798 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.93■□□□□ 0.94
EFNA4P52798 DUX4L18-201ENST00000553347 1267 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms