Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MRPL3P09001 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MRPL3P09001 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.26■■□□□ 1.15
MRPL3P09001 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MRPL3P09001 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MRPL3P09001 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.26■■□□□ 1.15
MRPL3P09001 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MRPL3P09001 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
MRPL3P09001 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.24■■□□□ 1.15
MRPL3P09001 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MRPL3P09001 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
MRPL3P09001 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MRPL3P09001 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MRPL3P09001 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.23■■□□□ 1.15
MRPL3P09001 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MRPL3P09001 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.22■■□□□ 1.15
MRPL3P09001 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
MRPL3P09001 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
MRPL3P09001 AC145676.1-201ENST00000514988 2004 ntBASIC22.21■■□□□ 1.15
MRPL3P09001 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MRPL3P09001 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.2■■□□□ 1.14
MRPL3P09001 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
MRPL3P09001 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MRPL3P09001 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
MRPL3P09001 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.19■■□□□ 1.14
MRPL3P09001 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
MRPL3P09001 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.19■■□□□ 1.14
MRPL3P09001 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.19■■□□□ 1.14
MRPL3P09001 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MRPL3P09001 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MRPL3P09001 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MRPL3P09001 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MRPL3P09001 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.18■■□□□ 1.14
MRPL3P09001 AP004609.3-201ENST00000610705 1884 ntBASIC22.18■■□□□ 1.14
MRPL3P09001 MIR3665-201ENST00000578708 105 ntBASIC22.18■■□□□ 1.14
MRPL3P09001 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.18■■□□□ 1.14
MRPL3P09001 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.18■■□□□ 1.14
MRPL3P09001 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MRPL3P09001 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRPL3P09001 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRPL3P09001 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
MRPL3P09001 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.16■■□□□ 1.14
MRPL3P09001 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MRPL3P09001 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MRPL3P09001 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MRPL3P09001 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.15■■□□□ 1.14
MRPL3P09001 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MRPL3P09001 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.15■■□□□ 1.14
MRPL3P09001 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MRPL3P09001 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MRPL3P09001 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MRPL3P09001 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
MRPL3P09001 AC020928.2-201ENST00000588717 2197 ntBASIC22.14■■□□□ 1.13
MRPL3P09001 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
MRPL3P09001 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRPL3P09001 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.13■■□□□ 1.13
MRPL3P09001 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.13■■□□□ 1.13
MRPL3P09001 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MRPL3P09001 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRPL3P09001 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.12■■□□□ 1.13
MRPL3P09001 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRPL3P09001 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRPL3P09001 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.12■■□□□ 1.13
MRPL3P09001 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.12■■□□□ 1.13
MRPL3P09001 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.12■■□□□ 1.13
MRPL3P09001 AC092803.2-201ENST00000564287 1899 ntBASIC22.11■■□□□ 1.13
MRPL3P09001 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MRPL3P09001 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
MRPL3P09001 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MRPL3P09001 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.11■■□□□ 1.13
MRPL3P09001 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRPL3P09001 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
MRPL3P09001 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRPL3P09001 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.1■■□□□ 1.13
MRPL3P09001 AC110285.7-201ENST00000624417 1536 ntBASIC22.1■■□□□ 1.13
MRPL3P09001 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRPL3P09001 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MRPL3P09001 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.09■■□□□ 1.13
MRPL3P09001 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
MRPL3P09001 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.08■■□□□ 1.13
MRPL3P09001 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MRPL3P09001 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MRPL3P09001 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRPL3P09001 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.07■■□□□ 1.12
MRPL3P09001 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MRPL3P09001 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRPL3P09001 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRPL3P09001 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MRPL3P09001 AP006261.1-201ENST00000584783 668 ntBASIC22.06■■□□□ 1.12
MRPL3P09001 DUSP8P4-201ENST00000399538 1761 ntBASIC22.06■■□□□ 1.12
MRPL3P09001 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MRPL3P09001 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
MRPL3P09001 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRPL3P09001 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.05■■□□□ 1.12
MRPL3P09001 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.05■■□□□ 1.12
MRPL3P09001 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
MRPL3P09001 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.05■■□□□ 1.12
MRPL3P09001 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRPL3P09001 AC087741.3-201ENST00000624270 1347 ntBASIC22.05■■□□□ 1.12
MRPL3P09001 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms