Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PPP1R3DO95685 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP1R3DO95685 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.45■■□□□ 1.18
PPP1R3DO95685 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PPP1R3DO95685 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PPP1R3DO95685 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.45■■□□□ 1.18
PPP1R3DO95685 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.45■■□□□ 1.18
PPP1R3DO95685 AC091060.1-201ENST00000623524 1766 ntBASIC22.45■■□□□ 1.18
PPP1R3DO95685 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.45■■□□□ 1.18
PPP1R3DO95685 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.44■■□□□ 1.18
PPP1R3DO95685 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PPP1R3DO95685 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP1R3DO95685 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP1R3DO95685 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP1R3DO95685 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP1R3DO95685 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PPP1R3DO95685 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PPP1R3DO95685 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP1R3DO95685 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.41■■□□□ 1.18
PPP1R3DO95685 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP1R3DO95685 AC021231.2-201ENST00000594613 730 ntBASIC22.41■■□□□ 1.18
PPP1R3DO95685 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP1R3DO95685 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP1R3DO95685 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP1R3DO95685 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP1R3DO95685 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP1R3DO95685 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP1R3DO95685 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP1R3DO95685 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PPP1R3DO95685 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP1R3DO95685 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP1R3DO95685 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP1R3DO95685 AP004609.3-201ENST00000610705 1884 ntBASIC22.39■■□□□ 1.17
PPP1R3DO95685 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP1R3DO95685 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PPP1R3DO95685 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PPP1R3DO95685 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP1R3DO95685 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP1R3DO95685 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP1R3DO95685 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
PPP1R3DO95685 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.37■■□□□ 1.17
PPP1R3DO95685 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP1R3DO95685 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP1R3DO95685 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3DO95685 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3DO95685 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3DO95685 DUX4L29-201ENST00000425409 679 ntBASIC22.36■■□□□ 1.17
PPP1R3DO95685 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP1R3DO95685 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3DO95685 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.35■■□□□ 1.17
PPP1R3DO95685 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PPP1R3DO95685 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PPP1R3DO95685 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PPP1R3DO95685 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.34■■□□□ 1.17
PPP1R3DO95685 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP1R3DO95685 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PPP1R3DO95685 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.33■■□□□ 1.17
PPP1R3DO95685 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP1R3DO95685 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP1R3DO95685 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PPP1R3DO95685 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP1R3DO95685 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP1R3DO95685 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PPP1R3DO95685 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.31■■□□□ 1.16
PPP1R3DO95685 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3DO95685 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.31■■□□□ 1.16
PPP1R3DO95685 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3DO95685 AC145676.1-201ENST00000514988 2004 ntBASIC22.31■■□□□ 1.16
PPP1R3DO95685 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.31■■□□□ 1.16
PPP1R3DO95685 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PPP1R3DO95685 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP1R3DO95685 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP1R3DO95685 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP1R3DO95685 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP1R3DO95685 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.29■■□□□ 1.16
PPP1R3DO95685 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.29■■□□□ 1.16
PPP1R3DO95685 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.29■■□□□ 1.16
PPP1R3DO95685 WHAMMP3-201ENST00000611636 1609 ntBASIC22.28■■□□□ 1.16
PPP1R3DO95685 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP1R3DO95685 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP1R3DO95685 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3DO95685 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3DO95685 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP1R3DO95685 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP1R3DO95685 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.27■■□□□ 1.16
PPP1R3DO95685 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PPP1R3DO95685 AC142472.1-201ENST00000612013 1741 ntBASIC22.26■■□□□ 1.15
PPP1R3DO95685 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPP1R3DO95685 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.26■■□□□ 1.15
PPP1R3DO95685 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP1R3DO95685 AC092803.2-201ENST00000564287 1899 ntBASIC22.26■■□□□ 1.15
PPP1R3DO95685 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPP1R3DO95685 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PPP1R3DO95685 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP1R3DO95685 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP1R3DO95685 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PPP1R3DO95685 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPP1R3DO95685 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.23■■□□□ 1.15
PPP1R3DO95685 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.23■■□□□ 1.15
PPP1R3DO95685 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms