Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF254O75437 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF254O75437 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF254O75437 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF254O75437 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF254O75437 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF254O75437 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF254O75437 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF254O75437 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF254O75437 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF254O75437 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF254O75437 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZNF254O75437 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF254O75437 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF254O75437 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.93■■□□□ 1.1
ZNF254O75437 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF254O75437 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF254O75437 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF254O75437 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ZNF254O75437 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF254O75437 AL162393.1-201ENST00000437852 946 ntBASIC21.92■■□□□ 1.1
ZNF254O75437 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF254O75437 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.92■■□□□ 1.1
ZNF254O75437 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ZNF254O75437 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.91■■□□□ 1.1
ZNF254O75437 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
ZNF254O75437 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.91■■□□□ 1.1
ZNF254O75437 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF254O75437 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
ZNF254O75437 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ZNF254O75437 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF254O75437 AC110285.7-201ENST00000624417 1536 ntBASIC21.9■■□□□ 1.1
ZNF254O75437 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF254O75437 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF254O75437 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.89■■□□□ 1.09
ZNF254O75437 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF254O75437 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF254O75437 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF254O75437 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF254O75437 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.88■■□□□ 1.09
ZNF254O75437 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF254O75437 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF254O75437 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF254O75437 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF254O75437 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF254O75437 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.87■■□□□ 1.09
ZNF254O75437 AC145676.1-201ENST00000514988 2004 ntBASIC21.87■■□□□ 1.09
ZNF254O75437 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ZNF254O75437 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ZNF254O75437 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF254O75437 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF254O75437 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF254O75437 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
ZNF254O75437 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.84■■□□□ 1.09
ZNF254O75437 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF254O75437 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF254O75437 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.84■■□□□ 1.09
ZNF254O75437 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF254O75437 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF254O75437 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF254O75437 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF254O75437 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ZNF254O75437 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.83■■□□□ 1.08
ZNF254O75437 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF254O75437 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.82■■□□□ 1.08
ZNF254O75437 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF254O75437 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.81■■□□□ 1.08
ZNF254O75437 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.81■■□□□ 1.08
ZNF254O75437 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF254O75437 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF254O75437 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.81■■□□□ 1.08
ZNF254O75437 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF254O75437 DUX4L29-201ENST00000425409 679 ntBASIC21.8■■□□□ 1.08
ZNF254O75437 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF254O75437 AC021231.2-201ENST00000594613 730 ntBASIC21.8■■□□□ 1.08
ZNF254O75437 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF254O75437 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.8■■□□□ 1.08
ZNF254O75437 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF254O75437 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF254O75437 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF254O75437 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF254O75437 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF254O75437 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF254O75437 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ZNF254O75437 AP004609.3-201ENST00000610705 1884 ntBASIC21.79■■□□□ 1.08
ZNF254O75437 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF254O75437 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.78■■□□□ 1.08
ZNF254O75437 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.78■■□□□ 1.08
ZNF254O75437 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF254O75437 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF254O75437 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF254O75437 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.77■■□□□ 1.08
ZNF254O75437 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
ZNF254O75437 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.77■■□□□ 1.08
ZNF254O75437 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.77■■□□□ 1.08
ZNF254O75437 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
ZNF254O75437 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.76■■□□□ 1.07
ZNF254O75437 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ZNF254O75437 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.76■■□□□ 1.07
ZNF254O75437 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms