Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SAA2-SAA4A0A096LPE2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.36■□□□□ 0.85
SAA2-SAA4A0A096LPE2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.35■□□□□ 0.85
SAA2-SAA4A0A096LPE2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L13-201ENST00000554103 1267 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L15-201ENST00000611059 1267 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L23-201ENST00000615195 1269 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L24-201ENST00000617576 1269 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L22-201ENST00000618238 1269 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L20-201ENST00000619712 1269 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L21-201ENST00000622058 1269 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L10-201ENST00000622460 1267 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L25-201ENST00000624915 1269 ntBASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SAA2-SAA4A0A096LPE2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SAA2-SAA4A0A096LPE2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L11-201ENST00000611504 1267 ntBASIC20.33■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L12-201ENST00000614593 1267 ntBASIC20.33■□□□□ 0.85
SAA2-SAA4A0A096LPE2 DUX4L14-201ENST00000621227 1267 ntBASIC20.33■□□□□ 0.85
SAA2-SAA4A0A096LPE2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.33■□□□□ 0.84
SAA2-SAA4A0A096LPE2 AC135731.1-201ENST00000569415 2548 ntBASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 ZNRF2P2-203ENST00000454624 420 ntBASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.32■□□□□ 0.84
SAA2-SAA4A0A096LPE2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SAA2-SAA4A0A096LPE2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.31■□□□□ 0.84
SAA2-SAA4A0A096LPE2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.31■□□□□ 0.84
SAA2-SAA4A0A096LPE2 AL449106.1-201ENST00000608517 1980 ntBASIC20.31■□□□□ 0.84
SAA2-SAA4A0A096LPE2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SAA2-SAA4A0A096LPE2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SAA2-SAA4A0A096LPE2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
SAA2-SAA4A0A096LPE2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.3■□□□□ 0.84
SAA2-SAA4A0A096LPE2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.3■□□□□ 0.84
SAA2-SAA4A0A096LPE2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SAA2-SAA4A0A096LPE2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SAA2-SAA4A0A096LPE2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SAA2-SAA4A0A096LPE2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SAA2-SAA4A0A096LPE2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.28■□□□□ 0.84
SAA2-SAA4A0A096LPE2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.28■□□□□ 0.84
SAA2-SAA4A0A096LPE2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SAA2-SAA4A0A096LPE2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SAA2-SAA4A0A096LPE2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SAA2-SAA4A0A096LPE2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SAA2-SAA4A0A096LPE2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SAA2-SAA4A0A096LPE2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SAA2-SAA4A0A096LPE2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.26■□□□□ 0.83
SAA2-SAA4A0A096LPE2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SAA2-SAA4A0A096LPE2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SAA2-SAA4A0A096LPE2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.24■□□□□ 0.83
SAA2-SAA4A0A096LPE2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SAA2-SAA4A0A096LPE2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SAA2-SAA4A0A096LPE2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SAA2-SAA4A0A096LPE2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 AP004609.3-201ENST00000610705 1884 ntBASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SAA2-SAA4A0A096LPE2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SAA2-SAA4A0A096LPE2 ABHD17AP4-201ENST00000411545 909 ntBASIC20.22■□□□□ 0.83
SAA2-SAA4A0A096LPE2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SAA2-SAA4A0A096LPE2 AC008813.1-201ENST00000536597 885 ntBASIC20.22■□□□□ 0.83
SAA2-SAA4A0A096LPE2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.22■□□□□ 0.83
SAA2-SAA4A0A096LPE2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SAA2-SAA4A0A096LPE2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SAA2-SAA4A0A096LPE2 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.21■□□□□ 0.83
SAA2-SAA4A0A096LPE2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.21■□□□□ 0.83
SAA2-SAA4A0A096LPE2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SAA2-SAA4A0A096LPE2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SAA2-SAA4A0A096LPE2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SAA2-SAA4A0A096LPE2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SAA2-SAA4A0A096LPE2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SAA2-SAA4A0A096LPE2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.2■□□□□ 0.82
SAA2-SAA4A0A096LPE2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SAA2-SAA4A0A096LPE2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.2■□□□□ 0.82
SAA2-SAA4A0A096LPE2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms