Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC11.78□□□□□ -0.523e-7■□□□□ 9
LSM11P83369 NPIPP1-203ENST00000547107 1071 ntBASIC8.53□□□□□ -1.043e-7■□□□□ 9
LSM11P83369 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.365e-6■□□□□ 9
LSM11P83369 MFSD3-203ENST00000528047 1433 ntTSL 319.32■□□□□ 0.685e-6■□□□□ 9
LSM11P83369 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.685e-6■□□□□ 9
LSM11P83369 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.14■□□□□ 0.495e-6■□□□□ 9
LSM11P83369 ABCG5-203ENST00000409962 2512 ntTSL 216.88■□□□□ 0.295e-6■□□□□ 9
LSM11P83369 DPEP1-205ENST00000564281 1772 ntTSL 516.44■□□□□ 0.225e-6■□□□□ 9
LSM11P83369 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.185e-6■□□□□ 9
LSM11P83369 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.185e-6■□□□□ 9
LSM11P83369 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.175e-6■□□□□ 9
LSM11P83369 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.125e-6■□□□□ 9
LSM11P83369 MFSD3-204ENST00000534427 849 ntTSL 214.85□□□□□ -0.035e-6■□□□□ 9
LSM11P83369 ABCG5-204ENST00000486512 3033 ntTSL 1 (best)14.76□□□□□ -0.055e-6■□□□□ 9
LSM11P83369 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.57□□□□□ -0.085e-6■□□□□ 9
LSM11P83369 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.115e-6■□□□□ 9
LSM11P83369 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.125e-6■□□□□ 9
LSM11P83369 GPS1-205ENST00000578168 583 ntTSL 214.17□□□□□ -0.145e-6■□□□□ 9
LSM11P83369 SLC12A7-204ENST00000513223 1066 ntTSL 514.15□□□□□ -0.145e-6■□□□□ 9
LSM11P83369 PIF1-207ENST00000559872 459 ntTSL 314.1□□□□□ -0.155e-6■□□□□ 9
LSM11P83369 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.215e-6■□□□□ 9
LSM11P83369 AFDN-220ENST00000511503 1257 ntTSL 213.45□□□□□ -0.265e-6■□□□□ 9
LSM11P83369 SLC12A7-206ENST00000634447 3142 ntTSL 513.22□□□□□ -0.295e-6■□□□□ 9
LSM11P83369 DPEP1-206ENST00000564645 512 ntTSL 213.17□□□□□ -0.35e-6■□□□□ 9
LSM11P83369 GPS1-218ENST00000583486 796 ntTSL 213.12□□□□□ -0.315e-6■□□□□ 9
LSM11P83369 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.95□□□□□ -0.345e-6■□□□□ 9
LSM11P83369 AFDN-222ENST00000515794 746 ntTSL 312.9□□□□□ -0.345e-6■□□□□ 9
LSM11P83369 F11-206ENST00000503841 563 ntTSL 212.77□□□□□ -0.375e-6■□□□□ 9
LSM11P83369 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.74□□□□□ -0.375e-6■□□□□ 9
LSM11P83369 PIF1-206ENST00000559522 650 ntTSL 312.42□□□□□ -0.425e-6■□□□□ 9
LSM11P83369 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.465e-6■□□□□ 9
LSM11P83369 AFDN-218ENST00000507704 1031 ntTSL 312.18□□□□□ -0.465e-6■□□□□ 9
LSM11P83369 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.485e-6■□□□□ 9
LSM11P83369 EHMT2-209ENST00000477678 679 ntTSL 211.74□□□□□ -0.535e-6■□□□□ 9
LSM11P83369 AURKB-207ENST00000580998 746 ntTSL 310.95□□□□□ -0.665e-6■□□□□ 9
LSM11P83369 F11-201ENST00000264691 670 ntTSL 310.21□□□□□ -0.775e-6■□□□□ 9
LSM11P83369 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC10.19□□□□□ -0.785e-6■□□□□ 9
LSM11P83369 F11-203ENST00000403665 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.845e-6■□□□□ 9
LSM11P83369 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.95e-6■□□□□ 9
LSM11P83369 AURKB-213ENST00000584972 739 ntTSL 39.42□□□□□ -0.95e-6■□□□□ 9
LSM11P83369 AURKB-203ENST00000577833 867 ntTSL 39.16□□□□□ -0.945e-6■□□□□ 9
LSM11P83369 AFDN-213ENST00000485634 606 ntTSL 29.11□□□□□ -0.955e-6■□□□□ 9
LSM11P83369 F11-202ENST00000264692 1916 ntTSL 2 BASIC8.93□□□□□ -0.985e-6■□□□□ 9
LSM11P83369 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC8.62□□□□□ -1.035e-6■□□□□ 9
LSM11P83369 AFDN-214ENST00000486649 423 ntTSL 28.54□□□□□ -1.045e-6■□□□□ 9
LSM11P83369 AURKB-205ENST00000578753 467 ntTSL 28.06□□□□□ -1.125e-6■□□□□ 9
LSM11P83369 RALY-209ENST00000489384 227 ntTSL 36.04□□□□□ -1.445e-6■□□□□ 9
LSM11P83369 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.595e-6■□□□□ 9
LSM11P83369 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.75■□□□□ 0.433e-8■□□□□ 9
LSM11P83369 ABCC6-205ENST00000576204 1914 ntTSL 515.73■□□□□ 0.113e-8■□□□□ 9
LSM11P83369 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.91□□□□□ -0.343e-8■□□□□ 9
LSM11P83369 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.483e-8■□□□□ 9
LSM11P83369 ST3GAL2-204ENST00000566097 904 ntTSL 224.18■■□□□ 1.469e-9■□□□□ 9
LSM11P83369 ST3GAL2-205ENST00000567586 557 ntTSL 421.71■■□□□ 1.079e-9■□□□□ 9
LSM11P83369 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC15.67■□□□□ 0.19e-9■□□□□ 9
LSM11P83369 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.029e-9■□□□□ 9
LSM11P83369 ST3GAL2-203ENST00000561708 581 ntTSL 414.76□□□□□ -0.059e-9■□□□□ 9
LSM11P83369 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC13□□□□□ -0.339e-9■□□□□ 9
LSM11P83369 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC12.45□□□□□ -0.429e-9■□□□□ 9
LSM11P83369 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC12.39□□□□□ -0.439e-9■□□□□ 9
LSM11P83369 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC11.07□□□□□ -0.649e-9■□□□□ 9
LSM11P83369 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC11.03□□□□□ -0.649e-9■□□□□ 9
LSM11P83369 AL157938.2-206ENST00000587408 629 ntTSL 59.85□□□□□ -0.839e-9■□□□□ 9
LSM11P83369 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC9.67□□□□□ -0.869e-9■□□□□ 9
LSM11P83369 CEP85-206ENST00000476272 3507 ntTSL 28.44□□□□□ -1.069e-9■□□□□ 9
LSM11P83369 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC8.18□□□□□ -1.19e-9■□□□□ 9
LSM11P83369 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.319e-9■□□□□ 9
LSM11P83369 SCARNA7-201ENST00000458797 330 ntBASIC13.16□□□□□ -0.31e-53■□□□□ 9
LSM11P83369 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.561e-53■□□□□ 9
LSM11P83369 KPNA4-203ENST00000483437 510 ntTSL 510.58□□□□□ -0.721e-53■□□□□ 9
LSM11P83369 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.03■■□□□ 1.282e-6■□□□□ 9
LSM11P83369 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.312e-6■□□□□ 9
LSM11P83369 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.12e-6■□□□□ 9
LSM11P83369 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.072e-6■□□□□ 9
LSM11P83369 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.32■□□□□ 0.042e-6■□□□□ 9
LSM11P83369 GPS1-224ENST00000584460 1855 ntTSL 215.26■□□□□ 0.032e-6■□□□□ 9
LSM11P83369 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.032e-6■□□□□ 9
LSM11P83369 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.42□□□□□ -0.12e-6■□□□□ 9
LSM11P83369 GPS1-203ENST00000392357 4076 ntTSL 1 (best)13.19□□□□□ -0.32e-6■□□□□ 9
LSM11P83369 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.072e-8■□□□□ 9
LSM11P83369 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.142e-8■□□□□ 9
LSM11P83369 SDR39U1-221ENST00000556707 1196 ntTSL 221.66■■□□□ 1.064e-7■□□□□ 9
LSM11P83369 SDR39U1-209ENST00000554947 1203 ntTSL 221.33■■□□□ 1.014e-7■□□□□ 9
LSM11P83369 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.644e-7■□□□□ 9
LSM11P83369 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.594e-7■□□□□ 9
LSM11P83369 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.564e-7■□□□□ 9
LSM11P83369 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.544e-7■□□□□ 9
LSM11P83369 SDR39U1-204ENST00000553343 681 ntTSL 218.27■□□□□ 0.524e-7■□□□□ 9
LSM11P83369 SDR39U1-218ENST00000556262 1960 ntTSL 217.28■□□□□ 0.364e-7■□□□□ 9
LSM11P83369 SDR39U1-203ENST00000544691 1507 ntTSL 1 (best)17.15■□□□□ 0.344e-7■□□□□ 9
LSM11P83369 SDR39U1-220ENST00000556548 2336 ntTSL 217.1■□□□□ 0.334e-7■□□□□ 9
LSM11P83369 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.75■□□□□ 0.274e-7■□□□□ 9
LSM11P83369 SDR39U1-210ENST00000555225 769 ntTSL 316.68■□□□□ 0.264e-7■□□□□ 9
LSM11P83369 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.064e-7■□□□□ 9
LSM11P83369 SDR39U1-219ENST00000556523 735 ntTSL 315.43■□□□□ 0.064e-7■□□□□ 9
LSM11P83369 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.2■□□□□ 0.024e-7■□□□□ 9
LSM11P83369 SDR39U1-217ENST00000556249 556 ntTSL 313.95□□□□□ -0.184e-7■□□□□ 9
LSM11P83369 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.92□□□□□ -0.184e-7■□□□□ 9
LSM11P83369 SDR39U1-205ENST00000553546 648 ntTSL 213.12□□□□□ -0.314e-7■□□□□ 9
LSM11P83369 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.59□□□□□ -0.394e-7■□□□□ 9
Retrieved 100 of 11,495 protein–RNA pairs in 381.4 ms