RNA–Protein interactions for RNA: ENST00000319838.9

GPR35-201, Transcript of G protein-coupled receptor 35, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GPR35, Length 2,249 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPR35-201ENST00000319838 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
GPR35-201ENST00000319838 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
GPR35-201ENST00000319838 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
GPR35-201ENST00000319838 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
GPR35-201ENST00000319838 DCAF8L2P0C7V8 631 aa33.87■■■■□ 3.01
GPR35-201ENST00000319838 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
GPR35-201ENST00000319838 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
GPR35-201ENST00000319838 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
GPR35-201ENST00000319838 CHIC1Q5VXU3 224 aa32.99■■■□□ 2.87
GPR35-201ENST00000319838 HRCP23327 699 aa32.8■■■□□ 2.84
GPR35-201ENST00000319838 SCRIBQ14160 1630 aa32.75■■■□□ 2.83
GPR35-201ENST00000319838 ABCC9O60706 1549 aa32.69■■■□□ 2.82
GPR35-201ENST00000319838 NACADO15069 1562 aa32.51■■■□□ 2.8
GPR35-201ENST00000319838 RSF1Q96T23 1441 aaPredicted RBP32.37■■■□□ 2.77
GPR35-201ENST00000319838 PCGF6Q9BYE7 350 aa32.33■■■□□ 2.77
GPR35-201ENST00000319838 CECR2Q9BXF3 1484 aa32.01■■■□□ 2.71
GPR35-201ENST00000319838 RB1CC1Q8TDY2 1594 aa32.01■■■□□ 2.71
GPR35-201ENST00000319838 LOC105371045A0A1W2PR82 267 aa31.92■■■□□ 2.7
GPR35-201ENST00000319838 PPARGC1BQ86YN6 1023 aaKnown RBP31.91■■■□□ 2.7
GPR35-201ENST00000319838 MROH2BQ7Z745 1585 aa31.9■■■□□ 2.7
GPR35-201ENST00000319838 TRIM26Q12899 539 aaPredicted RBP31.72■■■□□ 2.67
GPR35-201ENST00000319838 WIZO95785 1651 aa31.71■■■□□ 2.67
GPR35-201ENST00000319838 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
GPR35-201ENST00000319838 BAZ1AQ9NRL2 1556 aaPredicted RBP31.57■■■□□ 2.64
GPR35-201ENST00000319838 TRIM41Q8WV44 630 aa31.55■■■□□ 2.64
GPR35-201ENST00000319838 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
GPR35-201ENST00000319838 ZEB1P37275 1124 aaPredicted RBP31.29■■■□□ 2.6
GPR35-201ENST00000319838 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
GPR35-201ENST00000319838 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
GPR35-201ENST00000319838 FAM9AQ8IZU1 332 aaPredicted RBP31.2■■■□□ 2.58
GPR35-201ENST00000319838 BICRAQ9NZM4 1560 aa31.19■■■□□ 2.58
GPR35-201ENST00000319838 CCDC88BA6NC98 1476 aa31.07■■■□□ 2.56
GPR35-201ENST00000319838 SMARCA2P51531 1590 aa31.07■■■□□ 2.56
GPR35-201ENST00000319838 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.569e-7■■■□□ 16.2
GPR35-201ENST00000319838 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
GPR35-201ENST00000319838 EHMT2Q96KQ7 1210 aa30.85■■■□□ 2.53
GPR35-201ENST00000319838 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
GPR35-201ENST00000319838 ATAD2BQ9ULI0 1458 aa30.59■■■□□ 2.49
GPR35-201ENST00000319838 PELP1Q8IZL8 1130 aaKnown RBP30.51■■■□□ 2.48
GPR35-201ENST00000319838 SOGA1O94964 1423 aa30.5■■■□□ 2.47
GPR35-201ENST00000319838 SCAF1Q9H7N4 1312 aaKnown RBP30.47■■■□□ 2.47
GPR35-201ENST00000319838 BAZ1BQ9UIG0 1483 aaKnown RBP30.46■■■□□ 2.47
GPR35-201ENST00000319838 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
GPR35-201ENST00000319838 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
GPR35-201ENST00000319838 EEA1Q15075 1411 aa30.37■■■□□ 2.45
GPR35-201ENST00000319838 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
GPR35-201ENST00000319838 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
GPR35-201ENST00000319838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.26■■■□□ 2.43
GPR35-201ENST00000319838 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
GPR35-201ENST00000319838 CEP162Q5TB80 1403 aa30.23■■■□□ 2.43
GPR35-201ENST00000319838 CCER1Q8TC90 406 aaPredicted RBP30.23■■■□□ 2.43
GPR35-201ENST00000319838 GOLGA3Q08378 1498 aa30.12■■■□□ 2.41
GPR35-201ENST00000319838 NCAPD3P42695 1498 aa30.08■■■□□ 2.41
GPR35-201ENST00000319838 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
GPR35-201ENST00000319838 UBTFP17480 764 aaKnown RBP30.06■■■□□ 2.4
GPR35-201ENST00000319838 ACIN1Q9UKV3 1341 aaKnown RBP30.06■■■□□ 2.4
GPR35-201ENST00000319838 KIF21BO75037 1637 aa30■■■□□ 2.39
GPR35-201ENST00000319838 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
GPR35-201ENST00000319838 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
GPR35-201ENST00000319838 DIEXFQ68CQ4 756 aaKnown RBP29.94■■■□□ 2.38
GPR35-201ENST00000319838 NEUROD1Q13562 356 aa29.92■■■□□ 2.38
GPR35-201ENST00000319838 BIVM-ERCC5R4GMW8 1640 aa29.9■■■□□ 2.38
GPR35-201ENST00000319838 TTBK1Q5TCY1 1321 aaPredicted RBP29.8■■■□□ 2.36
GPR35-201ENST00000319838 CENPBP07199 599 aaPredicted RBP29.8■■■□□ 2.36
GPR35-201ENST00000319838 RAPGEF2Q9Y4G8 1499 aa29.78■■■□□ 2.36
GPR35-201ENST00000319838 CFTRP13569 1480 aa29.74■■■□□ 2.35
GPR35-201ENST00000319838 CLIP1P30622 1438 aa29.73■■■□□ 2.35
GPR35-201ENST00000319838 CUX1P39880 1505 aa29.72■■■□□ 2.35
GPR35-201ENST00000319838 GTF3C3Q9Y5Q9 886 aa29.65■■■□□ 2.34
GPR35-201ENST00000319838 ZNF316A6NFI3 1004 aaPredicted RBP29.63■■■□□ 2.33
GPR35-201ENST00000319838 VPS8Q8N3P4 1428 aa29.59■■■□□ 2.33
GPR35-201ENST00000319838 PRXQ9BXM0 1461 aa29.59■■■□□ 2.33
GPR35-201ENST00000319838 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
GPR35-201ENST00000319838 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
GPR35-201ENST00000319838 KIF27Q86VH2 1401 aa29.48■■■□□ 2.31
GPR35-201ENST00000319838 RANGAP1P46060 587 aaPredicted RBP29.44■■■□□ 2.3
GPR35-201ENST00000319838 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
GPR35-201ENST00000319838 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
GPR35-201ENST00000319838 ARAP1Q96P48 1450 aa29.34■■■□□ 2.29
GPR35-201ENST00000319838 APLP2Q06481 763 aa29.32■■■□□ 2.28
GPR35-201ENST00000319838 HNRNPUL2Q1KMD3 747 aaKnown RBP29.31■■■□□ 2.28
GPR35-201ENST00000319838 CUX2O14529 1486 aa29.23■■■□□ 2.27
GPR35-201ENST00000319838 MIER1Q8N108 512 aa29.22■■■□□ 2.27
GPR35-201ENST00000319838 FGD5Q6ZNL6 1462 aa29.21■■■□□ 2.27
GPR35-201ENST00000319838 IGF1RP08069 1367 aa29.2■■■□□ 2.26
GPR35-201ENST00000319838 FANCD2Q9BXW9 1451 aa29.14■■■□□ 2.26
GPR35-201ENST00000319838 YTHDC1Q96MU7 727 aaKnown RBP29.14■■■□□ 2.26
GPR35-201ENST00000319838 ARHGAP35Q9NRY4 1499 aa29.13■■■□□ 2.25
GPR35-201ENST00000319838 MYT1Q01538 1121 aa29.12■■■□□ 2.25
GPR35-201ENST00000319838 CLSPNQ9HAW4 1339 aa29.08■■■□□ 2.25
GPR35-201ENST00000319838 KANK4Q5T7N3 995 aaPredicted RBP29.06■■■□□ 2.24
GPR35-201ENST00000319838 CARMIL1Q5VZK9 1371 aa29.04■■■□□ 2.24
GPR35-201ENST00000319838 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
GPR35-201ENST00000319838 NESP48681 1621 aa29■■■□□ 2.23
GPR35-201ENST00000319838 DHX57Q6P158 1386 aaKnown RBP28.96■■■□□ 2.23
GPR35-201ENST00000319838 TOPBP1Q92547 1522 aa28.95■■■□□ 2.22
GPR35-201ENST00000319838 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
GPR35-201ENST00000319838 ABCA10Q8WWZ4 1543 aa28.9■■■□□ 2.22
GPR35-201ENST00000319838 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
GPR35-201ENST00000319838 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms