RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 NISCHQ9Y2I1 1504 aa44.22■■■■■ 4.67
SDR39U1-219ENST00000556523 CCDC180Q9P1Z9 1646 aa39.77■■■■□ 3.96
SDR39U1-219ENST00000556523 ABCC9O60706 1549 aa39.77■■■■□ 3.96
SDR39U1-219ENST00000556523 RB1CC1Q8TDY2 1594 aa37.89■■■■□ 3.66
SDR39U1-219ENST00000556523 NACADO15069 1562 aa37.59■■■■□ 3.61
SDR39U1-219ENST00000556523 DCAF8L2P0C7V8 631 aa37.34■■■■□ 3.57
SDR39U1-219ENST00000556523 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
SDR39U1-219ENST00000556523 MYO15BQ96JP2 1530 aa37.03■■■■□ 3.52
SDR39U1-219ENST00000556523 UNC13AQ9UPW8 1703 aa36.97■■■■□ 3.51
SDR39U1-219ENST00000556523 PABPN1Q86U42 306 aaKnown RBP eCLIP36.97■■■■□ 3.512e-8■□□□□ 11.2
SDR39U1-219ENST00000556523 BICRAQ9NZM4 1560 aa36.7■■■■□ 3.46
SDR39U1-219ENST00000556523 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
SDR39U1-219ENST00000556523 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
SDR39U1-219ENST00000556523 SHROOM4Q9ULL8 1493 aa36.31■■■■□ 3.4
SDR39U1-219ENST00000556523 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
SDR39U1-219ENST00000556523 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
SDR39U1-219ENST00000556523 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
SDR39U1-219ENST00000556523 CECR2Q9BXF3 1484 aa35.84■■■■□ 3.33
SDR39U1-219ENST00000556523 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
SDR39U1-219ENST00000556523 ATAD2BQ9ULI0 1458 aa34.55■■■■□ 3.12
SDR39U1-219ENST00000556523 SMARCA4P51532 1647 aa34.54■■■■□ 3.12
SDR39U1-219ENST00000556523 SMARCA2P51531 1590 aa34.51■■■■□ 3.12
SDR39U1-219ENST00000556523 HMGXB3Q12766 1538 aa34.45■■■■□ 3.11
SDR39U1-219ENST00000556523 ERCC6Q03468 1493 aa34.41■■■■□ 3.1
SDR39U1-219ENST00000556523 BAZ1AQ9NRL2 1556 aaPredicted RBP34.38■■■■□ 3.09
SDR39U1-219ENST00000556523 CUX2O14529 1486 aa34.33■■■■□ 3.09
SDR39U1-219ENST00000556523 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
SDR39U1-219ENST00000556523 DNAJC5Q9H3Z4 198 aa34.26■■■■□ 3.08
SDR39U1-219ENST00000556523 PEG3Q9GZU2 1588 aa34.18■■■■□ 3.06
SDR39U1-219ENST00000556523 NESP48681 1621 aa34.12■■■■□ 3.05
SDR39U1-219ENST00000556523 MROH2BQ7Z745 1585 aa34.06■■■■□ 3.04
SDR39U1-219ENST00000556523 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
SDR39U1-219ENST00000556523 THOC2Q8NI27 1593 aaKnown RBP33.84■■■■□ 3.01
SDR39U1-219ENST00000556523 PDS5BQ9NTI5 1447 aa33.74■■■□□ 2.99
SDR39U1-219ENST00000556523 KIF21AQ7Z4S6 1674 aa33.73■■■□□ 2.99
SDR39U1-219ENST00000556523 WIZO95785 1651 aa33.67■■■□□ 2.98
SDR39U1-219ENST00000556523 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
SDR39U1-219ENST00000556523 MRC2Q9UBG0 1479 aa33.46■■■□□ 2.95
SDR39U1-219ENST00000556523 WDR62O43379 1518 aa33.36■■■□□ 2.93
SDR39U1-219ENST00000556523 CEP164Q9UPV0 1460 aa33.33■■■□□ 2.93
SDR39U1-219ENST00000556523 RSF1Q96T23 1441 aaPredicted RBP33.32■■■□□ 2.92
SDR39U1-219ENST00000556523 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
SDR39U1-219ENST00000556523 FANCD2Q9BXW9 1451 aa33.26■■■□□ 2.92
SDR39U1-219ENST00000556523 CFTRP13569 1480 aa33.21■■■□□ 2.91
SDR39U1-219ENST00000556523 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
SDR39U1-219ENST00000556523 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
SDR39U1-219ENST00000556523 CCDC88BA6NC98 1476 aa32.84■■■□□ 2.85
SDR39U1-219ENST00000556523 TRIM41Q8WV44 630 aa32.81■■■□□ 2.84
SDR39U1-219ENST00000556523 OSCARQ8IYS5 282 aa32.69■■■□□ 2.82
SDR39U1-219ENST00000556523 IFT140Q96RY7 1462 aa32.65■■■□□ 2.82
SDR39U1-219ENST00000556523 TOPBP1Q92547 1522 aa32.61■■■□□ 2.81
SDR39U1-219ENST00000556523 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
SDR39U1-219ENST00000556523 ZNF608Q9ULD9 1512 aaPredicted RBP32.55■■■□□ 2.8
SDR39U1-219ENST00000556523 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
SDR39U1-219ENST00000556523 EIF4G3O43432 1585 aaKnown RBP32.44■■■□□ 2.78
SDR39U1-219ENST00000556523 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
SDR39U1-219ENST00000556523 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
SDR39U1-219ENST00000556523 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
SDR39U1-219ENST00000556523 TARBP1Q13395 1621 aaKnown RBP32.31■■■□□ 2.76
SDR39U1-219ENST00000556523 POLA1P09884 1462 aaPredicted RBP32.28■■■□□ 2.76
SDR39U1-219ENST00000556523 AQRO60306 1485 aaKnown RBP eCLIP32.24■■■□□ 2.75
SDR39U1-219ENST00000556523 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
SDR39U1-219ENST00000556523 CHD1O14646 1710 aa32.2■■■□□ 2.75
SDR39U1-219ENST00000556523 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
SDR39U1-219ENST00000556523 SOGA1O94964 1423 aa32.12■■■□□ 2.73
SDR39U1-219ENST00000556523 FBLN2P98095 1184 aa32.09■■■□□ 2.73
SDR39U1-219ENST00000556523 FGD5Q6ZNL6 1462 aa32.08■■■□□ 2.73
SDR39U1-219ENST00000556523 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
SDR39U1-219ENST00000556523 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
SDR39U1-219ENST00000556523 CUX1P39880 1505 aa32.02■■■□□ 2.72
SDR39U1-219ENST00000556523 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
SDR39U1-219ENST00000556523 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
SDR39U1-219ENST00000556523 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
SDR39U1-219ENST00000556523 ARAP1Q96P48 1450 aa31.89■■■□□ 2.7
SDR39U1-219ENST00000556523 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
SDR39U1-219ENST00000556523 SUPT5HO00267 1087 aaKnown RBP31.84■■■□□ 2.69
SDR39U1-219ENST00000556523 SYNJ1O43426 1573 aa31.84■■■□□ 2.69
SDR39U1-219ENST00000556523 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
SDR39U1-219ENST00000556523 CLASP1Q7Z460 1538 aa31.8■■■□□ 2.68
SDR39U1-219ENST00000556523 PBRM1Q86U86 1689 aa31.78■■■□□ 2.68
SDR39U1-219ENST00000556523 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
SDR39U1-219ENST00000556523 GAPVD1Q14C86 1478 aa31.75■■■□□ 2.67
SDR39U1-219ENST00000556523 ABCA10Q8WWZ4 1543 aa31.71■■■□□ 2.67
SDR39U1-219ENST00000556523 ABCA5Q8WWZ7 1642 aa31.68■■■□□ 2.66
SDR39U1-219ENST00000556523 TRHP20396 242 aaPredicted RBP31.65■■■□□ 2.66
SDR39U1-219ENST00000556523 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
SDR39U1-219ENST00000556523 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
SDR39U1-219ENST00000556523 TOP2BQ02880 1626 aa31.52■■■□□ 2.64
SDR39U1-219ENST00000556523 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
SDR39U1-219ENST00000556523 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
SDR39U1-219ENST00000556523 FHAD1B1AJZ9 1412 aa31.35■■■□□ 2.61
SDR39U1-219ENST00000556523 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
SDR39U1-219ENST00000556523 NUP160Q12769 1436 aa31.33■■■□□ 2.61
SDR39U1-219ENST00000556523 ERICH3Q5RHP9 1530 aa31.33■■■□□ 2.61
SDR39U1-219ENST00000556523 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.6
SDR39U1-219ENST00000556523 SHROOM2Q13796 1616 aa31.21■■■□□ 2.59
SDR39U1-219ENST00000556523 PRG4Q92954 1404 aaPredicted RBP31.05■■■□□ 2.56
SDR39U1-219ENST00000556523 RUSC2Q8N2Y8 1516 aa31.03■■■□□ 2.56
SDR39U1-219ENST00000556523 JPH4Q96JJ6 628 aa30.98■■■□□ 2.55
SDR39U1-219ENST00000556523 KIF27Q86VH2 1401 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms