RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 NISCHQ9Y2I1 1504 aa43.6■■■■■ 4.57
SDR39U1-206ENST00000553930 CCDC180Q9P1Z9 1646 aa38.98■■■■□ 3.83
SDR39U1-206ENST00000553930 ABCC9O60706 1549 aa38.78■■■■□ 3.8
SDR39U1-206ENST00000553930 RB1CC1Q8TDY2 1594 aa37.02■■■■□ 3.52
SDR39U1-206ENST00000553930 NACADO15069 1562 aa36.84■■■■□ 3.49
SDR39U1-206ENST00000553930 DCAF8L2P0C7V8 631 aa36.71■■■■□ 3.47
SDR39U1-206ENST00000553930 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
SDR39U1-206ENST00000553930 ZCCHC6Q5VYS8 1495 aaKnown RBP36.19■■■■□ 3.38
SDR39U1-206ENST00000553930 DNAJC5BQ9UF47 199 aa36.18■■■■□ 3.38
SDR39U1-206ENST00000553930 PABPN1Q86U42 306 aaKnown RBP eCLIP36.16■■■■□ 3.382e-8■□□□□ 11.2
SDR39U1-206ENST00000553930 UNC13AQ9UPW8 1703 aa36.09■■■■□ 3.37
SDR39U1-206ENST00000553930 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
SDR39U1-206ENST00000553930 BICRAQ9NZM4 1560 aa35.92■■■■□ 3.34
SDR39U1-206ENST00000553930 SCRIBQ14160 1630 aa35.54■■■■□ 3.28
SDR39U1-206ENST00000553930 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
SDR39U1-206ENST00000553930 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
SDR39U1-206ENST00000553930 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
SDR39U1-206ENST00000553930 CECR2Q9BXF3 1484 aa34.93■■■■□ 3.18
SDR39U1-206ENST00000553930 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
SDR39U1-206ENST00000553930 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.02
SDR39U1-206ENST00000553930 SMARCA4P51532 1647 aa33.94■■■■□ 3.02
SDR39U1-206ENST00000553930 SMARCA2P51531 1590 aa33.86■■■■□ 3.01
SDR39U1-206ENST00000553930 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
SDR39U1-206ENST00000553930 HMGXB3Q12766 1538 aa33.78■■■■□ 3
SDR39U1-206ENST00000553930 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
SDR39U1-206ENST00000553930 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SDR39U1-206ENST00000553930 MROH2BQ7Z745 1585 aa33.59■■■□□ 2.97
SDR39U1-206ENST00000553930 ERCC6Q03468 1493 aa33.49■■■□□ 2.95
SDR39U1-206ENST00000553930 NESP48681 1621 aa33.37■■■□□ 2.93
SDR39U1-206ENST00000553930 CUX2O14529 1486 aa33.35■■■□□ 2.93
SDR39U1-206ENST00000553930 LAMC3Q9Y6N6 1575 aa33.2■■■□□ 2.91
SDR39U1-206ENST00000553930 WIZO95785 1651 aa33.16■■■□□ 2.9
SDR39U1-206ENST00000553930 DNAJC5Q9H3Z4 198 aa33.07■■■□□ 2.88
SDR39U1-206ENST00000553930 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
SDR39U1-206ENST00000553930 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
SDR39U1-206ENST00000553930 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
SDR39U1-206ENST00000553930 THOC2Q8NI27 1593 aaKnown RBP32.98■■■□□ 2.87
SDR39U1-206ENST00000553930 KIF21AQ7Z4S6 1674 aa32.9■■■□□ 2.86
SDR39U1-206ENST00000553930 TOP2AP11388 1531 aaKnown RBP32.8■■■□□ 2.84
SDR39U1-206ENST00000553930 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
SDR39U1-206ENST00000553930 CFTRP13569 1480 aa32.68■■■□□ 2.82
SDR39U1-206ENST00000553930 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
SDR39U1-206ENST00000553930 WDR62O43379 1518 aa32.62■■■□□ 2.81
SDR39U1-206ENST00000553930 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
SDR39U1-206ENST00000553930 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
SDR39U1-206ENST00000553930 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
SDR39U1-206ENST00000553930 PRDM2Q13029 1718 aa32.26■■■□□ 2.76
SDR39U1-206ENST00000553930 TOPBP1Q92547 1522 aa32.02■■■□□ 2.72
SDR39U1-206ENST00000553930 ABCC8Q09428 1581 aa31.99■■■□□ 2.71
SDR39U1-206ENST00000553930 IFT140Q96RY7 1462 aa31.98■■■□□ 2.71
SDR39U1-206ENST00000553930 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
SDR39U1-206ENST00000553930 OSCARQ8IYS5 282 aa31.89■■■□□ 2.7
SDR39U1-206ENST00000553930 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
SDR39U1-206ENST00000553930 SUPT5HO00267 1087 aaKnown RBP31.72■■■□□ 2.67
SDR39U1-206ENST00000553930 POLA1P09884 1462 aaPredicted RBP31.71■■■□□ 2.67
SDR39U1-206ENST00000553930 TRIM41Q8WV44 630 aa31.7■■■□□ 2.66
SDR39U1-206ENST00000553930 EIF4G3O43432 1585 aaKnown RBP31.7■■■□□ 2.66
SDR39U1-206ENST00000553930 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.66
SDR39U1-206ENST00000553930 AQRO60306 1485 aaKnown RBP eCLIP31.63■■■□□ 2.65
SDR39U1-206ENST00000553930 SOGA1O94964 1423 aa31.59■■■□□ 2.65
SDR39U1-206ENST00000553930 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
SDR39U1-206ENST00000553930 CUX1P39880 1505 aa31.55■■■□□ 2.64
SDR39U1-206ENST00000553930 FGD5Q6ZNL6 1462 aa31.54■■■□□ 2.64
SDR39U1-206ENST00000553930 TDRD9Q8NDG6 1382 aaKnown RBP31.49■■■□□ 2.63
SDR39U1-206ENST00000553930 WDR97A6NE52 1622 aa31.42■■■□□ 2.62
SDR39U1-206ENST00000553930 FBLN2P98095 1184 aa31.39■■■□□ 2.62
SDR39U1-206ENST00000553930 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
SDR39U1-206ENST00000553930 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
SDR39U1-206ENST00000553930 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
SDR39U1-206ENST00000553930 CHD1O14646 1710 aa31.37■■■□□ 2.61
SDR39U1-206ENST00000553930 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
SDR39U1-206ENST00000553930 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
SDR39U1-206ENST00000553930 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
SDR39U1-206ENST00000553930 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.59
SDR39U1-206ENST00000553930 CHMP7Q8WUX9 453 aaPredicted RBP31.22■■■□□ 2.59
SDR39U1-206ENST00000553930 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
SDR39U1-206ENST00000553930 GAPVD1Q14C86 1478 aa31.2■■■□□ 2.59
SDR39U1-206ENST00000553930 SYNJ2O15056 1496 aa31.15■■■□□ 2.58
SDR39U1-206ENST00000553930 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
SDR39U1-206ENST00000553930 ABCA5Q8WWZ7 1642 aa31.11■■■□□ 2.57
SDR39U1-206ENST00000553930 CYB5RLQ6IPT4 315 aa31.11■■■□□ 2.57
SDR39U1-206ENST00000553930 PBRM1Q86U86 1689 aa31.1■■■□□ 2.57
SDR39U1-206ENST00000553930 TOP2BQ02880 1626 aa31.1■■■□□ 2.57
SDR39U1-206ENST00000553930 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
SDR39U1-206ENST00000553930 CLASP1Q7Z460 1538 aa31.09■■■□□ 2.57
SDR39U1-206ENST00000553930 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
SDR39U1-206ENST00000553930 ARAP1Q96P48 1450 aa31.05■■■□□ 2.56
SDR39U1-206ENST00000553930 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
SDR39U1-206ENST00000553930 ADAMTS12P58397 1594 aa30.86■■■□□ 2.53
SDR39U1-206ENST00000553930 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
SDR39U1-206ENST00000553930 ERICH3Q5RHP9 1530 aa30.82■■■□□ 2.52
SDR39U1-206ENST00000553930 NUP160Q12769 1436 aa30.77■■■□□ 2.52
SDR39U1-206ENST00000553930 CEP170Q5SW79 1584 aa30.72■■■□□ 2.51
SDR39U1-206ENST00000553930 TRHP20396 242 aaPredicted RBP30.69■■■□□ 2.5
SDR39U1-206ENST00000553930 ERCC6L2Q5T890 1561 aa30.59■■■□□ 2.49
SDR39U1-206ENST00000553930 SHROOM2Q13796 1616 aa30.56■■■□□ 2.48
SDR39U1-206ENST00000553930 KIF27Q86VH2 1401 aa30.54■■■□□ 2.48
SDR39U1-206ENST00000553930 IGF1RP08069 1367 aa30.51■■■□□ 2.47
SDR39U1-206ENST00000553930 JPH4Q96JJ6 628 aa30.47■■■□□ 2.47
SDR39U1-206ENST00000553930 PRG4Q92954 1404 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms