RNA–Protein interactions for RNA: ENST00000534427.1

MFSD3-204, Transcript of major facilitator superfamily domain containing 3, humanhuman

TSL 2

Gene MFSD3, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD3-204ENST00000534427 NISCHQ9Y2I1 1504 aa42.52■■■■■ 4.4
MFSD3-204ENST00000534427 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
MFSD3-204ENST00000534427 ABCC9O60706 1549 aa37.82■■■■□ 3.65
MFSD3-204ENST00000534427 RB1CC1Q8TDY2 1594 aa36.04■■■■□ 3.36
MFSD3-204ENST00000534427 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
MFSD3-204ENST00000534427 NACADO15069 1562 aa35.85■■■■□ 3.33
MFSD3-204ENST00000534427 MYO15BQ96JP2 1530 aa35.38■■■■□ 3.25
MFSD3-204ENST00000534427 PABPN1Q86U42 306 aaKnown RBP eCLIP35.31■■■■□ 3.24
MFSD3-204ENST00000534427 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
MFSD3-204ENST00000534427 UNC13AQ9UPW8 1703 aa35.27■■■■□ 3.24
MFSD3-204ENST00000534427 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
MFSD3-204ENST00000534427 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.21
MFSD3-204ENST00000534427 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
MFSD3-204ENST00000534427 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
MFSD3-204ENST00000534427 SHROOM4Q9ULL8 1493 aa34.43■■■■□ 3.1
MFSD3-204ENST00000534427 CC2D2AQ9P2K1 1620 aa34.13■■■■□ 3.05
MFSD3-204ENST00000534427 EIF4G1Q04637 1599 aaKnown RBP34.12■■■■□ 3.05
MFSD3-204ENST00000534427 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
MFSD3-204ENST00000534427 SMARCA4P51532 1647 aa33.11■■■□□ 2.89
MFSD3-204ENST00000534427 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
MFSD3-204ENST00000534427 ATAD2BQ9ULI0 1458 aa33.07■■■□□ 2.88
MFSD3-204ENST00000534427 BAZ1AQ9NRL2 1556 aaPredicted RBP32.97■■■□□ 2.87
MFSD3-204ENST00000534427 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
MFSD3-204ENST00000534427 HMGXB3Q12766 1538 aa32.86■■■□□ 2.85
MFSD3-204ENST00000534427 MROH2BQ7Z745 1585 aa32.81■■■□□ 2.84
MFSD3-204ENST00000534427 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
MFSD3-204ENST00000534427 PEG3Q9GZU2 1588 aa32.74■■■□□ 2.83
MFSD3-204ENST00000534427 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
MFSD3-204ENST00000534427 NESP48681 1621 aa32.58■■■□□ 2.81
MFSD3-204ENST00000534427 WIZO95785 1651 aa32.45■■■□□ 2.79
MFSD3-204ENST00000534427 CUX2O14529 1486 aa32.36■■■□□ 2.77
MFSD3-204ENST00000534427 LAMC3Q9Y6N6 1575 aa32.31■■■□□ 2.76
MFSD3-204ENST00000534427 RSF1Q96T23 1441 aaPredicted RBP32.23■■■□□ 2.75
MFSD3-204ENST00000534427 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
MFSD3-204ENST00000534427 KIF21AQ7Z4S6 1674 aa32.14■■■□□ 2.74
MFSD3-204ENST00000534427 PDS5BQ9NTI5 1447 aa32.13■■■□□ 2.73
MFSD3-204ENST00000534427 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
MFSD3-204ENST00000534427 DNAJC5Q9H3Z4 198 aa32.07■■■□□ 2.72
MFSD3-204ENST00000534427 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
MFSD3-204ENST00000534427 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
MFSD3-204ENST00000534427 CFTRP13569 1480 aa31.82■■■□□ 2.68
MFSD3-204ENST00000534427 FANCD2Q9BXW9 1451 aa31.78■■■□□ 2.68
MFSD3-204ENST00000534427 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
MFSD3-204ENST00000534427 WDR62O43379 1518 aa31.74■■■□□ 2.67
MFSD3-204ENST00000534427 CCDC88BA6NC98 1476 aa31.68■■■□□ 2.66
MFSD3-204ENST00000534427 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
MFSD3-204ENST00000534427 PRDM2Q13029 1718 aa31.51■■■□□ 2.63
MFSD3-204ENST00000534427 TOPBP1Q92547 1522 aa31.22■■■□□ 2.59
MFSD3-204ENST00000534427 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
MFSD3-204ENST00000534427 IFT140Q96RY7 1462 aa31.12■■■□□ 2.57
MFSD3-204ENST00000534427 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
MFSD3-204ENST00000534427 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
MFSD3-204ENST00000534427 ZNF608Q9ULD9 1512 aaPredicted RBP31.1■■■□□ 2.57
MFSD3-204ENST00000534427 OSCARQ8IYS5 282 aa31.01■■■□□ 2.55
MFSD3-204ENST00000534427 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
MFSD3-204ENST00000534427 EIF4G3O43432 1585 aaKnown RBP30.91■■■□□ 2.54
MFSD3-204ENST00000534427 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
MFSD3-204ENST00000534427 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
MFSD3-204ENST00000534427 AQRO60306 1485 aaKnown RBP eCLIP30.88■■■□□ 2.534e-6■■■□□ 16.1
MFSD3-204ENST00000534427 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
MFSD3-204ENST00000534427 SOGA1O94964 1423 aa30.81■■■□□ 2.52
MFSD3-204ENST00000534427 CUX1P39880 1505 aa30.79■■■□□ 2.52
MFSD3-204ENST00000534427 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
MFSD3-204ENST00000534427 TDRD9Q8NDG6 1382 aaKnown RBP30.74■■■□□ 2.51
MFSD3-204ENST00000534427 FBLN2P98095 1184 aa30.66■■■□□ 2.5
MFSD3-204ENST00000534427 CHD1O14646 1710 aa30.64■■■□□ 2.5
MFSD3-204ENST00000534427 RIMBP3CA6NJZ7 1639 aa30.57■■■□□ 2.48
MFSD3-204ENST00000534427 RIMBP3BA6NNM3 1639 aa30.57■■■□□ 2.48
MFSD3-204ENST00000534427 RIMBP3Q9UFD9 1639 aa30.57■■■□□ 2.48
MFSD3-204ENST00000534427 SNAPC4Q5SXM2 1469 aa30.54■■■□□ 2.48
MFSD3-204ENST00000534427 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
MFSD3-204ENST00000534427 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
MFSD3-204ENST00000534427 GRIN2BQ13224 1484 aa30.46■■■□□ 2.47
MFSD3-204ENST00000534427 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
MFSD3-204ENST00000534427 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
MFSD3-204ENST00000534427 MAGI1Q96QZ7 1491 aaPredicted RBP30.41■■■□□ 2.46
MFSD3-204ENST00000534427 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
MFSD3-204ENST00000534427 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
MFSD3-204ENST00000534427 PBRM1Q86U86 1689 aa30.39■■■□□ 2.45
MFSD3-204ENST00000534427 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
MFSD3-204ENST00000534427 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
MFSD3-204ENST00000534427 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
MFSD3-204ENST00000534427 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
MFSD3-204ENST00000534427 SYNJ2O15056 1496 aa30.33■■■□□ 2.45
MFSD3-204ENST00000534427 CYB5RLQ6IPT4 315 aa30.33■■■□□ 2.45
MFSD3-204ENST00000534427 CLASP1Q7Z460 1538 aa30.26■■■□□ 2.43
MFSD3-204ENST00000534427 ARAP1Q96P48 1450 aa30.22■■■□□ 2.43
MFSD3-204ENST00000534427 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
MFSD3-204ENST00000534427 GRIN2AQ12879 1464 aa30.09■■■□□ 2.41
MFSD3-204ENST00000534427 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
MFSD3-204ENST00000534427 ERICH3Q5RHP9 1530 aa30.02■■■□□ 2.4
MFSD3-204ENST00000534427 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
MFSD3-204ENST00000534427 NUP160Q12769 1436 aa29.95■■■□□ 2.38
MFSD3-204ENST00000534427 TRHP20396 242 aaPredicted RBP29.91■■■□□ 2.38
MFSD3-204ENST00000534427 ERCC6L2Q5T890 1561 aa29.88■■■□□ 2.37
MFSD3-204ENST00000534427 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
MFSD3-204ENST00000534427 SHROOM2Q13796 1616 aa29.78■■■□□ 2.36
MFSD3-204ENST00000534427 IGF1RP08069 1367 aa29.77■■■□□ 2.36
MFSD3-204ENST00000534427 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
MFSD3-204ENST00000534427 PRG4Q92954 1404 aaPredicted RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms