RNA–Protein interactions for RNA: ENST00000392357.1

GPS1-203, Transcript of G protein pathway suppressor 1, humanhuman

TSL 1 (best)

Gene GPS1, Length 4,076 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-203ENST00000392357 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
GPS1-203ENST00000392357 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
GPS1-203ENST00000392357 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
GPS1-203ENST00000392357 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
GPS1-203ENST00000392357 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
GPS1-203ENST00000392357 PCGF6Q9BYE7 350 aa22.91■■□□□ 1.26
GPS1-203ENST00000392357 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
GPS1-203ENST00000392357 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
GPS1-203ENST00000392357 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
GPS1-203ENST00000392357 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
GPS1-203ENST00000392357 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
GPS1-203ENST00000392357 HRCP23327 699 aa22.45■■□□□ 1.18
GPS1-203ENST00000392357 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
GPS1-203ENST00000392357 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
GPS1-203ENST00000392357 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
GPS1-203ENST00000392357 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
GPS1-203ENST00000392357 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
GPS1-203ENST00000392357 ABCC9O60706 1549 aa21.94■■□□□ 1.1
GPS1-203ENST00000392357 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
GPS1-203ENST00000392357 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
GPS1-203ENST00000392357 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
GPS1-203ENST00000392357 PELP1Q8IZL8 1130 aaKnown RBP21.61■■□□□ 1.05
GPS1-203ENST00000392357 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
GPS1-203ENST00000392357 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
GPS1-203ENST00000392357 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
GPS1-203ENST00000392357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
GPS1-203ENST00000392357 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
GPS1-203ENST00000392357 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
GPS1-203ENST00000392357 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.032e-7■■■□□ 16.2
GPS1-203ENST00000392357 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
GPS1-203ENST00000392357 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
GPS1-203ENST00000392357 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
GPS1-203ENST00000392357 APLP2Q06481 763 aa21.08■□□□□ 0.96
GPS1-203ENST00000392357 WIZO95785 1651 aa21.08■□□□□ 0.96
GPS1-203ENST00000392357 NACADO15069 1562 aa21.07■□□□□ 0.96
GPS1-203ENST00000392357 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
GPS1-203ENST00000392357 YTHDC1Q96MU7 727 aaKnown RBP20.99■□□□□ 0.95
GPS1-203ENST00000392357 MYT1Q01538 1121 aa20.95■□□□□ 0.94
GPS1-203ENST00000392357 DIEXFQ68CQ4 756 aaKnown RBP20.94■□□□□ 0.94
GPS1-203ENST00000392357 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
GPS1-203ENST00000392357 SOGA1O94964 1423 aa20.89■□□□□ 0.93
GPS1-203ENST00000392357 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
GPS1-203ENST00000392357 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
GPS1-203ENST00000392357 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
GPS1-203ENST00000392357 CEP162Q5TB80 1403 aa20.79■□□□□ 0.92
GPS1-203ENST00000392357 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
GPS1-203ENST00000392357 ITGAEP38570 1179 aa20.74■□□□□ 0.91
GPS1-203ENST00000392357 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
GPS1-203ENST00000392357 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
GPS1-203ENST00000392357 GTF3C3Q9Y5Q9 886 aa20.68■□□□□ 0.9
GPS1-203ENST00000392357 ATP1B4Q9UN42 357 aaPredicted RBP20.65■□□□□ 0.9
GPS1-203ENST00000392357 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
GPS1-203ENST00000392357 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
GPS1-203ENST00000392357 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
GPS1-203ENST00000392357 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
GPS1-203ENST00000392357 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
GPS1-203ENST00000392357 SMARCA4P51532 1647 aa20.52■□□□□ 0.88
GPS1-203ENST00000392357 CLIP1P30622 1438 aa20.48■□□□□ 0.87
GPS1-203ENST00000392357 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
GPS1-203ENST00000392357 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
GPS1-203ENST00000392357 MIER1Q8N108 512 aa20.43■□□□□ 0.86
GPS1-203ENST00000392357 EEA1Q15075 1411 aa20.4■□□□□ 0.86
GPS1-203ENST00000392357 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
GPS1-203ENST00000392357 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
GPS1-203ENST00000392357 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
GPS1-203ENST00000392357 KANK4Q5T7N3 995 aaPredicted RBP20.27■□□□□ 0.83
GPS1-203ENST00000392357 RAPGEF2Q9Y4G8 1499 aa20.26■□□□□ 0.83
GPS1-203ENST00000392357 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
GPS1-203ENST00000392357 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
GPS1-203ENST00000392357 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
GPS1-203ENST00000392357 VPS8Q8N3P4 1428 aa20.17■□□□□ 0.82
GPS1-203ENST00000392357 SYNJ1O43426 1573 aa20.14■□□□□ 0.81
GPS1-203ENST00000392357 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
GPS1-203ENST00000392357 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
GPS1-203ENST00000392357 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
GPS1-203ENST00000392357 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
GPS1-203ENST00000392357 BCANQ96GW7 911 aa19.95■□□□□ 0.78
GPS1-203ENST00000392357 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
GPS1-203ENST00000392357 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
GPS1-203ENST00000392357 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
GPS1-203ENST00000392357 KIF21BO75037 1637 aa19.92■□□□□ 0.78
GPS1-203ENST00000392357 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
GPS1-203ENST00000392357 CUX2O14529 1486 aa19.87■□□□□ 0.77
GPS1-203ENST00000392357 CCNB3Q8WWL7 1395 aa19.86■□□□□ 0.77
GPS1-203ENST00000392357 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
GPS1-203ENST00000392357 CNGB1Q14028 1251 aaPredicted RBP19.82■□□□□ 0.76
GPS1-203ENST00000392357 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
GPS1-203ENST00000392357 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
GPS1-203ENST00000392357 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
GPS1-203ENST00000392357 CHIC2Q9UKJ5 165 aa19.74■□□□□ 0.75
GPS1-203ENST00000392357 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
GPS1-203ENST00000392357 PRXQ9BXM0 1461 aa19.72■□□□□ 0.75
GPS1-203ENST00000392357 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
GPS1-203ENST00000392357 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
GPS1-203ENST00000392357 IGF1RP08069 1367 aa19.71■□□□□ 0.75
GPS1-203ENST00000392357 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
GPS1-203ENST00000392357 CUX1P39880 1505 aa19.7■□□□□ 0.74
GPS1-203ENST00000392357 NEFLP07196 543 aa19.68■□□□□ 0.74
GPS1-203ENST00000392357 NCAPD3P42695 1498 aa19.66■□□□□ 0.74
GPS1-203ENST00000392357 ANP32CO43423 234 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms