RNA–Protein interactions for RNA: ENST00000555225.5

SDR39U1-210, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-210ENST00000555225 NISCHQ9Y2I1 1504 aa45.11■■■■■ 4.81
SDR39U1-210ENST00000555225 ABCC9O60706 1549 aa40.28■■■■■ 4.04
SDR39U1-210ENST00000555225 CCDC180Q9P1Z9 1646 aa39.96■■■■□ 3.99
SDR39U1-210ENST00000555225 RB1CC1Q8TDY2 1594 aa38.14■■■■□ 3.7
SDR39U1-210ENST00000555225 DNAJC5BQ9UF47 199 aa38.09■■■■□ 3.69
SDR39U1-210ENST00000555225 NACADO15069 1562 aa37.78■■■■□ 3.64
SDR39U1-210ENST00000555225 DCAF8L2P0C7V8 631 aa37.63■■■■□ 3.61
SDR39U1-210ENST00000555225 ZCCHC6Q5VYS8 1495 aaKnown RBP37.61■■■■□ 3.61
SDR39U1-210ENST00000555225 MYO15BQ96JP2 1530 aa37.45■■■■□ 3.59
SDR39U1-210ENST00000555225 UNC13AQ9UPW8 1703 aa37.44■■■■□ 3.58
SDR39U1-210ENST00000555225 DCAF1Q9Y4B6 1507 aa37.38■■■■□ 3.57
SDR39U1-210ENST00000555225 PABPN1Q86U42 306 aaKnown RBP eCLIP37.34■■■■□ 3.572e-8■□□□□ 11.2
SDR39U1-210ENST00000555225 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
SDR39U1-210ENST00000555225 SHROOM4Q9ULL8 1493 aa36.53■■■■□ 3.44
SDR39U1-210ENST00000555225 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
SDR39U1-210ENST00000555225 CC2D2AQ9P2K1 1620 aa36.41■■■■□ 3.42
SDR39U1-210ENST00000555225 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
SDR39U1-210ENST00000555225 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
SDR39U1-210ENST00000555225 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
SDR39U1-210ENST00000555225 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
SDR39U1-210ENST00000555225 SMARCA4P51532 1647 aa34.91■■■■□ 3.18
SDR39U1-210ENST00000555225 CUX2O14529 1486 aa34.86■■■■□ 3.17
SDR39U1-210ENST00000555225 NCAPD3P42695 1498 aa34.85■■■■□ 3.17
SDR39U1-210ENST00000555225 ERCC6Q03468 1493 aa34.76■■■■□ 3.15
SDR39U1-210ENST00000555225 ATAD2BQ9ULI0 1458 aa34.73■■■■□ 3.15
SDR39U1-210ENST00000555225 MROH2BQ7Z745 1585 aa34.73■■■■□ 3.15
SDR39U1-210ENST00000555225 SMARCA2P51531 1590 aa34.68■■■■□ 3.14
SDR39U1-210ENST00000555225 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
SDR39U1-210ENST00000555225 PEG3Q9GZU2 1588 aa34.59■■■■□ 3.13
SDR39U1-210ENST00000555225 NESP48681 1621 aa34.54■■■■□ 3.12
SDR39U1-210ENST00000555225 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
SDR39U1-210ENST00000555225 BAZ1BQ9UIG0 1483 aaKnown RBP34.42■■■■□ 3.1
SDR39U1-210ENST00000555225 THOC2Q8NI27 1593 aaKnown RBP34.35■■■■□ 3.09
SDR39U1-210ENST00000555225 WIZO95785 1651 aa34.35■■■■□ 3.09
SDR39U1-210ENST00000555225 LAMC3Q9Y6N6 1575 aa34.18■■■■□ 3.06
SDR39U1-210ENST00000555225 KIF21AQ7Z4S6 1674 aa34.13■■■■□ 3.05
SDR39U1-210ENST00000555225 TOP2AP11388 1531 aaKnown RBP34.05■■■■□ 3.04
SDR39U1-210ENST00000555225 PDS5BQ9NTI5 1447 aa33.89■■■■□ 3.02
SDR39U1-210ENST00000555225 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
SDR39U1-210ENST00000555225 CADPSQ9ULU8 1353 aa33.73■■■□□ 2.99
SDR39U1-210ENST00000555225 MRC2Q9UBG0 1479 aa33.73■■■□□ 2.99
SDR39U1-210ENST00000555225 WDR62O43379 1518 aa33.72■■■□□ 2.99
SDR39U1-210ENST00000555225 CCDC88BA6NC98 1476 aa33.66■■■□□ 2.98
SDR39U1-210ENST00000555225 CFTRP13569 1480 aa33.5■■■□□ 2.95
SDR39U1-210ENST00000555225 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
SDR39U1-210ENST00000555225 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
SDR39U1-210ENST00000555225 FANCD2Q9BXW9 1451 aa33.43■■■□□ 2.94
SDR39U1-210ENST00000555225 URB2Q14146 1524 aaKnown RBP33.24■■■□□ 2.91
SDR39U1-210ENST00000555225 PRDM2Q13029 1718 aa33.18■■■□□ 2.9
SDR39U1-210ENST00000555225 OSCARQ8IYS5 282 aa33.01■■■□□ 2.87
SDR39U1-210ENST00000555225 RIMBP3CA6NJZ7 1639 aa32.89■■■□□ 2.86
SDR39U1-210ENST00000555225 RIMBP3BA6NNM3 1639 aa32.89■■■□□ 2.86
SDR39U1-210ENST00000555225 RIMBP3Q9UFD9 1639 aa32.89■■■□□ 2.86
SDR39U1-210ENST00000555225 ZNF608Q9ULD9 1512 aaPredicted RBP32.89■■■□□ 2.86
SDR39U1-210ENST00000555225 ABCC8Q09428 1581 aa32.84■■■□□ 2.85
SDR39U1-210ENST00000555225 IFT140Q96RY7 1462 aa32.83■■■□□ 2.85
SDR39U1-210ENST00000555225 TOPBP1Q92547 1522 aa32.78■■■□□ 2.84
SDR39U1-210ENST00000555225 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
SDR39U1-210ENST00000555225 DNMBPQ6XZF7 1577 aa32.72■■■□□ 2.83
SDR39U1-210ENST00000555225 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
SDR39U1-210ENST00000555225 CHD1O14646 1710 aa32.58■■■□□ 2.81
SDR39U1-210ENST00000555225 TARBP1Q13395 1621 aaKnown RBP32.57■■■□□ 2.8
SDR39U1-210ENST00000555225 CUX1P39880 1505 aa32.56■■■□□ 2.8
SDR39U1-210ENST00000555225 WRNQ14191 1432 aaPredicted RBP eCLIP32.52■■■□□ 2.8
SDR39U1-210ENST00000555225 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.79
SDR39U1-210ENST00000555225 POLA1P09884 1462 aaPredicted RBP32.47■■■□□ 2.79
SDR39U1-210ENST00000555225 FGD5Q6ZNL6 1462 aa32.43■■■□□ 2.78
SDR39U1-210ENST00000555225 SOGA1O94964 1423 aa32.4■■■□□ 2.78
SDR39U1-210ENST00000555225 ARAP1Q96P48 1450 aa32.4■■■□□ 2.78
SDR39U1-210ENST00000555225 TOP2BQ02880 1626 aa32.38■■■□□ 2.77
SDR39U1-210ENST00000555225 BIVM-ERCC5R4GMW8 1640 aa32.36■■■□□ 2.77
SDR39U1-210ENST00000555225 SYNJ1O43426 1573 aa32.34■■■□□ 2.77
SDR39U1-210ENST00000555225 RAD54L2Q9Y4B4 1467 aa32.31■■■□□ 2.76
SDR39U1-210ENST00000555225 CYB5RLQ6IPT4 315 aa32.31■■■□□ 2.76
SDR39U1-210ENST00000555225 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
SDR39U1-210ENST00000555225 FBLN2P98095 1184 aa32.19■■■□□ 2.74
SDR39U1-210ENST00000555225 CLASP1Q7Z460 1538 aa32.18■■■□□ 2.74
SDR39U1-210ENST00000555225 TDRD9Q8NDG6 1382 aaKnown RBP32.18■■■□□ 2.74
SDR39U1-210ENST00000555225 WDR97A6NE52 1622 aa32.16■■■□□ 2.74
SDR39U1-210ENST00000555225 ABCA10Q8WWZ4 1543 aa32.16■■■□□ 2.74
SDR39U1-210ENST00000555225 TRHP20396 242 aaPredicted RBP32.04■■■□□ 2.72
SDR39U1-210ENST00000555225 MAGI1Q96QZ7 1491 aaPredicted RBP32.03■■■□□ 2.72
SDR39U1-210ENST00000555225 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
SDR39U1-210ENST00000555225 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
SDR39U1-210ENST00000555225 PBRM1Q86U86 1689 aa31.96■■■□□ 2.71
SDR39U1-210ENST00000555225 ABCA5Q8WWZ7 1642 aa31.95■■■□□ 2.71
SDR39U1-210ENST00000555225 SYNJ2O15056 1496 aa31.94■■■□□ 2.7
SDR39U1-210ENST00000555225 CHMP7Q8WUX9 453 aaPredicted RBP31.88■■■□□ 2.69
SDR39U1-210ENST00000555225 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
SDR39U1-210ENST00000555225 ERICH3Q5RHP9 1530 aa31.79■■■□□ 2.68
SDR39U1-210ENST00000555225 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
SDR39U1-210ENST00000555225 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
SDR39U1-210ENST00000555225 IGF1RP08069 1367 aa31.68■■■□□ 2.66
SDR39U1-210ENST00000555225 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
SDR39U1-210ENST00000555225 ADAMTS12P58397 1594 aa31.64■■■□□ 2.65
SDR39U1-210ENST00000555225 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
SDR39U1-210ENST00000555225 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
SDR39U1-210ENST00000555225 RUSC2Q8N2Y8 1516 aa31.55■■■□□ 2.64
SDR39U1-210ENST00000555225 CUL7Q14999 1698 aa31.53■■■□□ 2.64
SDR39U1-210ENST00000555225 NUP160Q12769 1436 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms