RNA–Protein interactions for RNA: ENST00000458797.1

SCARNA7-201, small Cajal body-specific RNA 7, humanhuman

BASIC

Gene SCARNA7, Length 330 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA7-201ENST00000458797 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
SCARNA7-201ENST00000458797 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
SCARNA7-201ENST00000458797 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
SCARNA7-201ENST00000458797 PHF23Q9BUL5 403 aaPredicted RBP25.8■■□□□ 1.72
SCARNA7-201ENST00000458797 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
SCARNA7-201ENST00000458797 FOXD1Q16676 465 aa23.94■■□□□ 1.42
SCARNA7-201ENST00000458797 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
SCARNA7-201ENST00000458797 ABCC9O60706 1549 aa23.45■■□□□ 1.34
SCARNA7-201ENST00000458797 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
SCARNA7-201ENST00000458797 ADRA2BP18089 450 aa22.89■■□□□ 1.25
SCARNA7-201ENST00000458797 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
SCARNA7-201ENST00000458797 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
SCARNA7-201ENST00000458797 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
SCARNA7-201ENST00000458797 MSH5O43196 834 aa22.13■■□□□ 1.13
SCARNA7-201ENST00000458797 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
SCARNA7-201ENST00000458797 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
SCARNA7-201ENST00000458797 NACADO15069 1562 aa22.04■■□□□ 1.12
SCARNA7-201ENST00000458797 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
SCARNA7-201ENST00000458797 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
SCARNA7-201ENST00000458797 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
SCARNA7-201ENST00000458797 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
SCARNA7-201ENST00000458797 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
SCARNA7-201ENST00000458797 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
SCARNA7-201ENST00000458797 SCRIBQ14160 1630 aa21.43■■□□□ 1.02
SCARNA7-201ENST00000458797 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
SCARNA7-201ENST00000458797 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
SCARNA7-201ENST00000458797 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
SCARNA7-201ENST00000458797 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
SCARNA7-201ENST00000458797 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
SCARNA7-201ENST00000458797 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
SCARNA7-201ENST00000458797 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
SCARNA7-201ENST00000458797 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
SCARNA7-201ENST00000458797 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
SCARNA7-201ENST00000458797 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
SCARNA7-201ENST00000458797 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
SCARNA7-201ENST00000458797 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
SCARNA7-201ENST00000458797 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
SCARNA7-201ENST00000458797 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
SCARNA7-201ENST00000458797 KCNA4P22459 653 aa20.23■□□□□ 0.83
SCARNA7-201ENST00000458797 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
SCARNA7-201ENST00000458797 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
SCARNA7-201ENST00000458797 NESP48681 1621 aa20.21■□□□□ 0.83
SCARNA7-201ENST00000458797 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
SCARNA7-201ENST00000458797 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
SCARNA7-201ENST00000458797 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
SCARNA7-201ENST00000458797 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
SCARNA7-201ENST00000458797 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
SCARNA7-201ENST00000458797 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
SCARNA7-201ENST00000458797 CUX2O14529 1486 aa20.03■□□□□ 0.8
SCARNA7-201ENST00000458797 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.8
SCARNA7-201ENST00000458797 RNF216Q9NWF9 866 aaPredicted RBP19.99■□□□□ 0.79
SCARNA7-201ENST00000458797 WIZO95785 1651 aa19.99■□□□□ 0.79
SCARNA7-201ENST00000458797 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
SCARNA7-201ENST00000458797 HOXD11P31277 338 aaPredicted RBP19.94■□□□□ 0.78
SCARNA7-201ENST00000458797 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
SCARNA7-201ENST00000458797 LAMC3Q9Y6N6 1575 aa19.9■□□□□ 0.78
SCARNA7-201ENST00000458797 DCAF8L1A6NGE4 600 aa19.83■□□□□ 0.77
SCARNA7-201ENST00000458797 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
SCARNA7-201ENST00000458797 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
SCARNA7-201ENST00000458797 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
SCARNA7-201ENST00000458797 MRC2Q9UBG0 1479 aa19.63■□□□□ 0.73
SCARNA7-201ENST00000458797 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
SCARNA7-201ENST00000458797 WDR62O43379 1518 aa19.61■□□□□ 0.73
SCARNA7-201ENST00000458797 FANCD2Q9BXW9 1451 aa19.57■□□□□ 0.72
SCARNA7-201ENST00000458797 CEP164Q9UPV0 1460 aa19.55■□□□□ 0.72
SCARNA7-201ENST00000458797 CFTRP13569 1480 aa19.54■□□□□ 0.72
SCARNA7-201ENST00000458797 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
SCARNA7-201ENST00000458797 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
SCARNA7-201ENST00000458797 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
SCARNA7-201ENST00000458797 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
SCARNA7-201ENST00000458797 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
SCARNA7-201ENST00000458797 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
SCARNA7-201ENST00000458797 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
SCARNA7-201ENST00000458797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
SCARNA7-201ENST00000458797 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
SCARNA7-201ENST00000458797 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
SCARNA7-201ENST00000458797 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
SCARNA7-201ENST00000458797 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
SCARNA7-201ENST00000458797 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
SCARNA7-201ENST00000458797 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.64
SCARNA7-201ENST00000458797 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
SCARNA7-201ENST00000458797 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
SCARNA7-201ENST00000458797 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
SCARNA7-201ENST00000458797 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
SCARNA7-201ENST00000458797 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
SCARNA7-201ENST00000458797 CHD1O14646 1710 aa19.02■□□□□ 0.63
SCARNA7-201ENST00000458797 ABCC8Q09428 1581 aa19.01■□□□□ 0.63
SCARNA7-201ENST00000458797 CUX1P39880 1505 aa18.95■□□□□ 0.62
SCARNA7-201ENST00000458797 SLC4A2P04920 1241 aa18.94■□□□□ 0.62
SCARNA7-201ENST00000458797 FGD5Q6ZNL6 1462 aa18.93■□□□□ 0.62
SCARNA7-201ENST00000458797 RNF39Q9H2S5 420 aa18.93■□□□□ 0.62
SCARNA7-201ENST00000458797 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
SCARNA7-201ENST00000458797 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
SCARNA7-201ENST00000458797 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
SCARNA7-201ENST00000458797 SOGA1O94964 1423 aa18.91■□□□□ 0.62
SCARNA7-201ENST00000458797 FBLN2P98095 1184 aa18.86■□□□□ 0.61
SCARNA7-201ENST00000458797 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
SCARNA7-201ENST00000458797 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
SCARNA7-201ENST00000458797 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
SCARNA7-201ENST00000458797 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms