RNA–Protein interactions for RNA: ENST00000559522.1

PIF1-206, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-206ENST00000559522 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
PIF1-206ENST00000559522 ABCC9O60706 1549 aa31.68■■■□□ 2.66
PIF1-206ENST00000559522 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
PIF1-206ENST00000559522 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
PIF1-206ENST00000559522 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
PIF1-206ENST00000559522 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
PIF1-206ENST00000559522 NACADO15069 1562 aa29.73■■■□□ 2.35
PIF1-206ENST00000559522 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
PIF1-206ENST00000559522 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.27
PIF1-206ENST00000559522 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
PIF1-206ENST00000559522 BICRAQ9NZM4 1560 aa29.03■■■□□ 2.24
PIF1-206ENST00000559522 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
PIF1-206ENST00000559522 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
PIF1-206ENST00000559522 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
PIF1-206ENST00000559522 SHROOM4Q9ULL8 1493 aa28.55■■■□□ 2.16
PIF1-206ENST00000559522 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
PIF1-206ENST00000559522 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
PIF1-206ENST00000559522 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
PIF1-206ENST00000559522 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
PIF1-206ENST00000559522 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
PIF1-206ENST00000559522 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
PIF1-206ENST00000559522 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
PIF1-206ENST00000559522 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
PIF1-206ENST00000559522 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
PIF1-206ENST00000559522 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
PIF1-206ENST00000559522 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
PIF1-206ENST00000559522 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
PIF1-206ENST00000559522 CUX2O14529 1486 aa27.18■■□□□ 1.94
PIF1-206ENST00000559522 NESP48681 1621 aa27.16■■□□□ 1.94
PIF1-206ENST00000559522 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
PIF1-206ENST00000559522 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
PIF1-206ENST00000559522 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
PIF1-206ENST00000559522 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
PIF1-206ENST00000559522 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
PIF1-206ENST00000559522 WIZO95785 1651 aa26.7■■□□□ 1.87
PIF1-206ENST00000559522 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
PIF1-206ENST00000559522 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
PIF1-206ENST00000559522 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
PIF1-206ENST00000559522 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
PIF1-206ENST00000559522 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
PIF1-206ENST00000559522 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
PIF1-206ENST00000559522 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
PIF1-206ENST00000559522 WDR62O43379 1518 aa26.36■■□□□ 1.81
PIF1-206ENST00000559522 CFTRP13569 1480 aa26.36■■□□□ 1.81
PIF1-206ENST00000559522 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
PIF1-206ENST00000559522 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
PIF1-206ENST00000559522 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
PIF1-206ENST00000559522 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
PIF1-206ENST00000559522 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
PIF1-206ENST00000559522 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
PIF1-206ENST00000559522 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
PIF1-206ENST00000559522 PRDM2Q13029 1718 aa25.83■■□□□ 1.72
PIF1-206ENST00000559522 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
PIF1-206ENST00000559522 FBLN2P98095 1184 aa25.8■■□□□ 1.72
PIF1-206ENST00000559522 AQRO60306 1485 aaKnown RBP eCLIP25.74■■□□□ 1.712e-6■■■□□ 18.3
PIF1-206ENST00000559522 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
PIF1-206ENST00000559522 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
PIF1-206ENST00000559522 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
PIF1-206ENST00000559522 SOGA1O94964 1423 aa25.63■■□□□ 1.69
PIF1-206ENST00000559522 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
PIF1-206ENST00000559522 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
PIF1-206ENST00000559522 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
PIF1-206ENST00000559522 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
PIF1-206ENST00000559522 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
PIF1-206ENST00000559522 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
PIF1-206ENST00000559522 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
PIF1-206ENST00000559522 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
PIF1-206ENST00000559522 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
PIF1-206ENST00000559522 CHMP7Q8WUX9 453 aaPredicted RBP25.52■■□□□ 1.68
PIF1-206ENST00000559522 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
PIF1-206ENST00000559522 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.66
PIF1-206ENST00000559522 CHD1O14646 1710 aa25.42■■□□□ 1.66
PIF1-206ENST00000559522 CUX1P39880 1505 aa25.41■■□□□ 1.66
PIF1-206ENST00000559522 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
PIF1-206ENST00000559522 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
PIF1-206ENST00000559522 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
PIF1-206ENST00000559522 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
PIF1-206ENST00000559522 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
PIF1-206ENST00000559522 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
PIF1-206ENST00000559522 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
PIF1-206ENST00000559522 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
PIF1-206ENST00000559522 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
PIF1-206ENST00000559522 CLASP1Q7Z460 1538 aa25.13■■□□□ 1.61
PIF1-206ENST00000559522 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
PIF1-206ENST00000559522 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
PIF1-206ENST00000559522 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
PIF1-206ENST00000559522 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
PIF1-206ENST00000559522 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
PIF1-206ENST00000559522 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
PIF1-206ENST00000559522 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
PIF1-206ENST00000559522 NUP160Q12769 1436 aa24.85■■□□□ 1.57
PIF1-206ENST00000559522 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
PIF1-206ENST00000559522 ERCC6L2Q5T890 1561 aa24.84■■□□□ 1.57
PIF1-206ENST00000559522 JPH4Q96JJ6 628 aa24.83■■□□□ 1.57
PIF1-206ENST00000559522 CEP170Q5SW79 1584 aa24.83■■□□□ 1.57
PIF1-206ENST00000559522 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
PIF1-206ENST00000559522 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
PIF1-206ENST00000559522 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
PIF1-206ENST00000559522 NPM1P06748 294 aaKnown RBP eCLIP24.68■■□□□ 1.54
PIF1-206ENST00000559522 IGF1RP08069 1367 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms