RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 NISCHQ9Y2I1 1504 aa42.01■■■■■ 4.32
SDR39U1-218ENST00000556262 CCDC180Q9P1Z9 1646 aa36.5■■■■□ 3.43
SDR39U1-218ENST00000556262 ZCCHC6Q5VYS8 1495 aaKnown RBP35.3■■■■□ 3.24
SDR39U1-218ENST00000556262 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
SDR39U1-218ENST00000556262 ABCC9O60706 1549 aa34.64■■■■□ 3.14
SDR39U1-218ENST00000556262 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
SDR39U1-218ENST00000556262 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
SDR39U1-218ENST00000556262 MYO15BQ96JP2 1530 aa34.16■■■■□ 3.06
SDR39U1-218ENST00000556262 NACADO15069 1562 aa34■■■■□ 3.03
SDR39U1-218ENST00000556262 SCRIBQ14160 1630 aa33.74■■■□□ 2.99
SDR39U1-218ENST00000556262 RB1CC1Q8TDY2 1594 aa33.7■■■□□ 2.99
SDR39U1-218ENST00000556262 SUPT5HO00267 1087 aaKnown RBP33.27■■■□□ 2.92
SDR39U1-218ENST00000556262 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
SDR39U1-218ENST00000556262 BICRAQ9NZM4 1560 aa32.76■■■□□ 2.84
SDR39U1-218ENST00000556262 PABPN1Q86U42 306 aaKnown RBP eCLIP32.75■■■□□ 2.832e-8■□□□□ 11.2
SDR39U1-218ENST00000556262 CECR2Q9BXF3 1484 aa32.73■■■□□ 2.83
SDR39U1-218ENST00000556262 RSF1Q96T23 1441 aaPredicted RBP32.67■■■□□ 2.82
SDR39U1-218ENST00000556262 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
SDR39U1-218ENST00000556262 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
SDR39U1-218ENST00000556262 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
SDR39U1-218ENST00000556262 WIZO95785 1651 aa32.28■■■□□ 2.76
SDR39U1-218ENST00000556262 TOP2AP11388 1531 aaKnown RBP31.86■■■□□ 2.69
SDR39U1-218ENST00000556262 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.68
SDR39U1-218ENST00000556262 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
SDR39U1-218ENST00000556262 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
SDR39U1-218ENST00000556262 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
SDR39U1-218ENST00000556262 SMARCA2P51531 1590 aa31.66■■■□□ 2.66
SDR39U1-218ENST00000556262 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
SDR39U1-218ENST00000556262 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
SDR39U1-218ENST00000556262 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
SDR39U1-218ENST00000556262 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
SDR39U1-218ENST00000556262 CC2D2AQ9P2K1 1620 aa31.29■■■□□ 2.6
SDR39U1-218ENST00000556262 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
SDR39U1-218ENST00000556262 ABCC8Q09428 1581 aa31.02■■■□□ 2.56
SDR39U1-218ENST00000556262 CFTRP13569 1480 aa30.76■■■□□ 2.52
SDR39U1-218ENST00000556262 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
SDR39U1-218ENST00000556262 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
SDR39U1-218ENST00000556262 LOC105371045A0A1W2PR82 267 aa30.71■■■□□ 2.51
SDR39U1-218ENST00000556262 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
SDR39U1-218ENST00000556262 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
SDR39U1-218ENST00000556262 SYNJ1O43426 1573 aa30.64■■■□□ 2.49
SDR39U1-218ENST00000556262 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
SDR39U1-218ENST00000556262 SOGA1O94964 1423 aa30.46■■■□□ 2.47
SDR39U1-218ENST00000556262 NESP48681 1621 aa30.46■■■□□ 2.47
SDR39U1-218ENST00000556262 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
SDR39U1-218ENST00000556262 EHMT2Q96KQ7 1210 aa30.39■■■□□ 2.46
SDR39U1-218ENST00000556262 CUX1P39880 1505 aa30.39■■■□□ 2.46
SDR39U1-218ENST00000556262 BIVM-ERCC5R4GMW8 1640 aa30.39■■■□□ 2.45
SDR39U1-218ENST00000556262 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
SDR39U1-218ENST00000556262 FANCD2Q9BXW9 1451 aa30.33■■■□□ 2.45
SDR39U1-218ENST00000556262 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
SDR39U1-218ENST00000556262 EEA1Q15075 1411 aa30.24■■■□□ 2.43
SDR39U1-218ENST00000556262 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
SDR39U1-218ENST00000556262 CEP164Q9UPV0 1460 aa30.11■■■□□ 2.41
SDR39U1-218ENST00000556262 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
SDR39U1-218ENST00000556262 FGD5Q6ZNL6 1462 aa30.04■■■□□ 2.4
SDR39U1-218ENST00000556262 KIF21AQ7Z4S6 1674 aa30.03■■■□□ 2.4
SDR39U1-218ENST00000556262 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
SDR39U1-218ENST00000556262 TOPBP1Q92547 1522 aa30.01■■■□□ 2.39
SDR39U1-218ENST00000556262 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
SDR39U1-218ENST00000556262 KIF27Q86VH2 1401 aa29.93■■■□□ 2.38
SDR39U1-218ENST00000556262 GOLGA3Q08378 1498 aa29.9■■■□□ 2.38
SDR39U1-218ENST00000556262 KIF21BO75037 1637 aa29.88■■■□□ 2.37
SDR39U1-218ENST00000556262 POLA1P09884 1462 aaPredicted RBP29.88■■■□□ 2.37
SDR39U1-218ENST00000556262 CUX2O14529 1486 aa29.88■■■□□ 2.37
SDR39U1-218ENST00000556262 UBTFP17480 764 aaKnown RBP29.87■■■□□ 2.37
SDR39U1-218ENST00000556262 RAD54L2Q9Y4B4 1467 aa29.85■■■□□ 2.37
SDR39U1-218ENST00000556262 TNIKQ9UKE5 1360 aa29.83■■■□□ 2.37
SDR39U1-218ENST00000556262 RAPGEF2Q9Y4G8 1499 aa29.81■■■□□ 2.36
SDR39U1-218ENST00000556262 PRXQ9BXM0 1461 aa29.75■■■□□ 2.35
SDR39U1-218ENST00000556262 ABCA10Q8WWZ4 1543 aa29.73■■■□□ 2.35
SDR39U1-218ENST00000556262 CEP162Q5TB80 1403 aa29.72■■■□□ 2.35
SDR39U1-218ENST00000556262 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
SDR39U1-218ENST00000556262 IGF1RP08069 1367 aa29.7■■■□□ 2.34
SDR39U1-218ENST00000556262 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
SDR39U1-218ENST00000556262 ERCC6Q03468 1493 aa29.64■■■□□ 2.34
SDR39U1-218ENST00000556262 WDR97A6NE52 1622 aa29.62■■■□□ 2.33
SDR39U1-218ENST00000556262 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
SDR39U1-218ENST00000556262 WDR62O43379 1518 aa29.55■■■□□ 2.32
SDR39U1-218ENST00000556262 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
SDR39U1-218ENST00000556262 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
SDR39U1-218ENST00000556262 RANGAP1P46060 587 aaPredicted RBP29.49■■■□□ 2.31
SDR39U1-218ENST00000556262 ABCA5Q8WWZ7 1642 aa29.48■■■□□ 2.31
SDR39U1-218ENST00000556262 CLIP1P30622 1438 aa29.46■■■□□ 2.31
SDR39U1-218ENST00000556262 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
SDR39U1-218ENST00000556262 GAPVD1Q14C86 1478 aa29.45■■■□□ 2.3
SDR39U1-218ENST00000556262 PCGF6Q9BYE7 350 aa29.37■■■□□ 2.29
SDR39U1-218ENST00000556262 CUL7Q14999 1698 aa29.37■■■□□ 2.29
SDR39U1-218ENST00000556262 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
SDR39U1-218ENST00000556262 AQRO60306 1485 aaKnown RBP eCLIP29.35■■■□□ 2.29
SDR39U1-218ENST00000556262 PPARGC1BQ86YN6 1023 aaKnown RBP29.33■■■□□ 2.29
SDR39U1-218ENST00000556262 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
SDR39U1-218ENST00000556262 PBRM1Q86U86 1689 aa29.26■■■□□ 2.28
SDR39U1-218ENST00000556262 TRIM26Q12899 539 aaPredicted RBP29.23■■■□□ 2.27
SDR39U1-218ENST00000556262 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
SDR39U1-218ENST00000556262 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
SDR39U1-218ENST00000556262 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
SDR39U1-218ENST00000556262 ARHGAP35Q9NRY4 1499 aa29.15■■■□□ 2.26
SDR39U1-218ENST00000556262 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
SDR39U1-218ENST00000556262 FHAD1B1AJZ9 1412 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms