RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
SDR39U1-205ENST00000553546 ABCC9O60706 1549 aa33.83■■■■□ 3.01
SDR39U1-205ENST00000553546 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
SDR39U1-205ENST00000553546 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
SDR39U1-205ENST00000553546 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
SDR39U1-205ENST00000553546 NACADO15069 1562 aa31.8■■■□□ 2.68
SDR39U1-205ENST00000553546 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
SDR39U1-205ENST00000553546 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
SDR39U1-205ENST00000553546 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.61
SDR39U1-205ENST00000553546 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.62e-8■□□□□ 11.2
SDR39U1-205ENST00000553546 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
SDR39U1-205ENST00000553546 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
SDR39U1-205ENST00000553546 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
SDR39U1-205ENST00000553546 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.5
SDR39U1-205ENST00000553546 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
SDR39U1-205ENST00000553546 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
SDR39U1-205ENST00000553546 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
SDR39U1-205ENST00000553546 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
SDR39U1-205ENST00000553546 DNAJC5Q9H3Z4 198 aa30.06■■■□□ 2.4
SDR39U1-205ENST00000553546 CUX2O14529 1486 aa29.42■■■□□ 2.3
SDR39U1-205ENST00000553546 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
SDR39U1-205ENST00000553546 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
SDR39U1-205ENST00000553546 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
SDR39U1-205ENST00000553546 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
SDR39U1-205ENST00000553546 ERCC6Q03468 1493 aa29.21■■■□□ 2.27
SDR39U1-205ENST00000553546 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.26
SDR39U1-205ENST00000553546 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
SDR39U1-205ENST00000553546 PEG3Q9GZU2 1588 aa29.03■■■□□ 2.24
SDR39U1-205ENST00000553546 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
SDR39U1-205ENST00000553546 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
SDR39U1-205ENST00000553546 NESP48681 1621 aa28.91■■■□□ 2.22
SDR39U1-205ENST00000553546 THOC2Q8NI27 1593 aaKnown RBP28.82■■■□□ 2.2
SDR39U1-205ENST00000553546 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
SDR39U1-205ENST00000553546 WIZO95785 1651 aa28.59■■■□□ 2.17
SDR39U1-205ENST00000553546 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.16
SDR39U1-205ENST00000553546 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
SDR39U1-205ENST00000553546 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
SDR39U1-205ENST00000553546 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
SDR39U1-205ENST00000553546 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
SDR39U1-205ENST00000553546 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
SDR39U1-205ENST00000553546 WDR62O43379 1518 aa28.22■■■□□ 2.11
SDR39U1-205ENST00000553546 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
SDR39U1-205ENST00000553546 CFTRP13569 1480 aa28.15■■■□□ 2.1
SDR39U1-205ENST00000553546 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.09
SDR39U1-205ENST00000553546 FANCD2Q9BXW9 1451 aa28.1■■■□□ 2.09
SDR39U1-205ENST00000553546 PRDM2Q13029 1718 aa27.95■■■□□ 2.07
SDR39U1-205ENST00000553546 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
SDR39U1-205ENST00000553546 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
SDR39U1-205ENST00000553546 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
SDR39U1-205ENST00000553546 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
SDR39U1-205ENST00000553546 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
SDR39U1-205ENST00000553546 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
SDR39U1-205ENST00000553546 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
SDR39U1-205ENST00000553546 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
SDR39U1-205ENST00000553546 IFT140Q96RY7 1462 aa27.57■■■□□ 2
SDR39U1-205ENST00000553546 ARHGEF11O15085 1522 aa27.57■■■□□ 2
SDR39U1-205ENST00000553546 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
SDR39U1-205ENST00000553546 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
SDR39U1-205ENST00000553546 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
SDR39U1-205ENST00000553546 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
SDR39U1-205ENST00000553546 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
SDR39U1-205ENST00000553546 CHD1O14646 1710 aa27.29■■□□□ 1.96
SDR39U1-205ENST00000553546 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
SDR39U1-205ENST00000553546 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
SDR39U1-205ENST00000553546 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
SDR39U1-205ENST00000553546 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.95
SDR39U1-205ENST00000553546 SOGA1O94964 1423 aa27.19■■□□□ 1.94
SDR39U1-205ENST00000553546 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
SDR39U1-205ENST00000553546 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
SDR39U1-205ENST00000553546 CUX1P39880 1505 aa27.17■■□□□ 1.94
SDR39U1-205ENST00000553546 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
SDR39U1-205ENST00000553546 TRHP20396 242 aaPredicted RBP27.13■■□□□ 1.93
SDR39U1-205ENST00000553546 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
SDR39U1-205ENST00000553546 FBLN2P98095 1184 aa26.99■■□□□ 1.91
SDR39U1-205ENST00000553546 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
SDR39U1-205ENST00000553546 GRIN2BQ13224 1484 aa26.97■■□□□ 1.91
SDR39U1-205ENST00000553546 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
SDR39U1-205ENST00000553546 CLASP1Q7Z460 1538 aa26.94■■□□□ 1.9
SDR39U1-205ENST00000553546 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
SDR39U1-205ENST00000553546 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
SDR39U1-205ENST00000553546 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
SDR39U1-205ENST00000553546 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
SDR39U1-205ENST00000553546 SYNJ2O15056 1496 aa26.86■■□□□ 1.89
SDR39U1-205ENST00000553546 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
SDR39U1-205ENST00000553546 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
SDR39U1-205ENST00000553546 BIVM-ERCC5R4GMW8 1640 aa26.85■■□□□ 1.89
SDR39U1-205ENST00000553546 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
SDR39U1-205ENST00000553546 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
SDR39U1-205ENST00000553546 AEBP2Q6ZN18 517 aaPredicted RBP26.79■■□□□ 1.88
SDR39U1-205ENST00000553546 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
SDR39U1-205ENST00000553546 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
SDR39U1-205ENST00000553546 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
SDR39U1-205ENST00000553546 FHAD1B1AJZ9 1412 aa26.57■■□□□ 1.84
SDR39U1-205ENST00000553546 NUP160Q12769 1436 aa26.51■■□□□ 1.83
SDR39U1-205ENST00000553546 CEP170Q5SW79 1584 aa26.49■■□□□ 1.83
SDR39U1-205ENST00000553546 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
SDR39U1-205ENST00000553546 SHROOM2Q13796 1616 aa26.39■■□□□ 1.81
SDR39U1-205ENST00000553546 KIF13AQ9H1H9 1805 aa26.34■■□□□ 1.81
SDR39U1-205ENST00000553546 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
SDR39U1-205ENST00000553546 CUL7Q14999 1698 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms