Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 AC007029.1-201ENST00000604183 313 ntBASIC29.78■■■□□ 2.36
SNCAIPQ9Y6H5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SNCAIPQ9Y6H5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNCAIPQ9Y6H5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNCAIPQ9Y6H5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNCAIPQ9Y6H5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SNCAIPQ9Y6H5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.77■■■□□ 2.36
SNCAIPQ9Y6H5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
SNCAIPQ9Y6H5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.76■■■□□ 2.35
SNCAIPQ9Y6H5 AC129492.7-201ENST00000622992 756 ntBASIC29.76■■■□□ 2.35
SNCAIPQ9Y6H5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNCAIPQ9Y6H5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.75■■■□□ 2.35
SNCAIPQ9Y6H5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
SNCAIPQ9Y6H5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNCAIPQ9Y6H5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.74■■■□□ 2.35
SNCAIPQ9Y6H5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.74■■■□□ 2.35
SNCAIPQ9Y6H5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
SNCAIPQ9Y6H5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
SNCAIPQ9Y6H5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SNCAIPQ9Y6H5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SNCAIPQ9Y6H5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.73■■■□□ 2.35
SNCAIPQ9Y6H5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SNCAIPQ9Y6H5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.72■■■□□ 2.35
SNCAIPQ9Y6H5 AL592293.1-201ENST00000502889 1188 ntBASIC29.72■■■□□ 2.35
SNCAIPQ9Y6H5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SNCAIPQ9Y6H5 AC009831.1-201ENST00000580420 1582 ntBASIC29.72■■■□□ 2.35
SNCAIPQ9Y6H5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SNCAIPQ9Y6H5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNCAIPQ9Y6H5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.68■■■□□ 2.34
SNCAIPQ9Y6H5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNCAIPQ9Y6H5 DUX4L18-201ENST00000553347 1267 ntBASIC29.68■■■□□ 2.34
SNCAIPQ9Y6H5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNCAIPQ9Y6H5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNCAIPQ9Y6H5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 AC133552.2-201ENST00000619106 1032 ntBASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.67■■■□□ 2.34
SNCAIPQ9Y6H5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SNCAIPQ9Y6H5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SNCAIPQ9Y6H5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
SNCAIPQ9Y6H5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SNCAIPQ9Y6H5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.64■■■□□ 2.33
SNCAIPQ9Y6H5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
SNCAIPQ9Y6H5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
SNCAIPQ9Y6H5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNCAIPQ9Y6H5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNCAIPQ9Y6H5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SNCAIPQ9Y6H5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.62■■■□□ 2.33
SNCAIPQ9Y6H5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
SNCAIPQ9Y6H5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNCAIPQ9Y6H5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
SNCAIPQ9Y6H5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SNCAIPQ9Y6H5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
SNCAIPQ9Y6H5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.6■■■□□ 2.33
SNCAIPQ9Y6H5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNCAIPQ9Y6H5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.6■■■□□ 2.33
SNCAIPQ9Y6H5 SMPD5-203ENST00000639008 1464 ntBASIC29.6■■■□□ 2.33
SNCAIPQ9Y6H5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNCAIPQ9Y6H5 AP004833.2-201ENST00000532228 1454 ntBASIC29.59■■■□□ 2.33
SNCAIPQ9Y6H5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNCAIPQ9Y6H5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNCAIPQ9Y6H5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
SNCAIPQ9Y6H5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
SNCAIPQ9Y6H5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SNCAIPQ9Y6H5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.58■■■□□ 2.33
SNCAIPQ9Y6H5 AC026202.3-201ENST00000600805 1127 ntBASIC29.58■■■□□ 2.33
SNCAIPQ9Y6H5 AL359258.2-201ENST00000564063 1566 ntBASIC29.57■■■□□ 2.32
SNCAIPQ9Y6H5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.57■■■□□ 2.32
SNCAIPQ9Y6H5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNCAIPQ9Y6H5 AC100797.4-201ENST00000631653 1827 ntBASIC29.57■■■□□ 2.32
SNCAIPQ9Y6H5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNCAIPQ9Y6H5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNCAIPQ9Y6H5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.56■■■□□ 2.32
SNCAIPQ9Y6H5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
SNCAIPQ9Y6H5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNCAIPQ9Y6H5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.55■■■□□ 2.32
SNCAIPQ9Y6H5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
SNCAIPQ9Y6H5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNCAIPQ9Y6H5 ST7-AS1-201ENST00000456775 1889 ntBASIC29.54■■■□□ 2.32
SNCAIPQ9Y6H5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
SNCAIPQ9Y6H5 AC025884.2-201ENST00000553429 711 ntBASIC29.53■■■□□ 2.32
SNCAIPQ9Y6H5 AL451085.2-201ENST00000605085 799 ntBASIC29.53■■■□□ 2.32
SNCAIPQ9Y6H5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SNCAIPQ9Y6H5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SNCAIPQ9Y6H5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SNCAIPQ9Y6H5 AL035685.1-201ENST00000636663 812 ntBASIC29.52■■■□□ 2.32
SNCAIPQ9Y6H5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SNCAIPQ9Y6H5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms