Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC38.97■■■■□ 3.83
CDC42BPBQ9Y5S2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
CDC42BPBQ9Y5S2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CDC42BPBQ9Y5S2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CDC42BPBQ9Y5S2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
CDC42BPBQ9Y5S2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
CDC42BPBQ9Y5S2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
CDC42BPBQ9Y5S2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
CDC42BPBQ9Y5S2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CDC42BPBQ9Y5S2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC38.92■■■■□ 3.82
CDC42BPBQ9Y5S2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
CDC42BPBQ9Y5S2 AC129492.7-201ENST00000622992 756 ntBASIC38.92■■■■□ 3.82
CDC42BPBQ9Y5S2 AL592293.1-201ENST00000502889 1188 ntBASIC38.92■■■■□ 3.82
CDC42BPBQ9Y5S2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
CDC42BPBQ9Y5S2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC38.91■■■■□ 3.82
CDC42BPBQ9Y5S2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
CDC42BPBQ9Y5S2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
CDC42BPBQ9Y5S2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
CDC42BPBQ9Y5S2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC38.9■■■■□ 3.82
CDC42BPBQ9Y5S2 AC126177.7-201ENST00000547904 679 ntBASIC38.9■■■■□ 3.82
CDC42BPBQ9Y5S2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC38.89■■■■□ 3.82
CDC42BPBQ9Y5S2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC38.89■■■■□ 3.82
CDC42BPBQ9Y5S2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
CDC42BPBQ9Y5S2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC38.89■■■■□ 3.82
CDC42BPBQ9Y5S2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
CDC42BPBQ9Y5S2 AC009831.1-201ENST00000580420 1582 ntBASIC38.87■■■■□ 3.81
CDC42BPBQ9Y5S2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC38.87■■■■□ 3.81
CDC42BPBQ9Y5S2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC38.87■■■■□ 3.81
CDC42BPBQ9Y5S2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC38.87■■■■□ 3.81
CDC42BPBQ9Y5S2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC38.86■■■■□ 3.81
CDC42BPBQ9Y5S2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
CDC42BPBQ9Y5S2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC38.83■■■■□ 3.81
CDC42BPBQ9Y5S2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC38.83■■■■□ 3.81
CDC42BPBQ9Y5S2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CDC42BPBQ9Y5S2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CDC42BPBQ9Y5S2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
CDC42BPBQ9Y5S2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
CDC42BPBQ9Y5S2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC38.81■■■■□ 3.8
CDC42BPBQ9Y5S2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
CDC42BPBQ9Y5S2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC38.81■■■■□ 3.8
CDC42BPBQ9Y5S2 AC025884.2-201ENST00000553429 711 ntBASIC38.81■■■■□ 3.8
CDC42BPBQ9Y5S2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC38.8■■■■□ 3.8
CDC42BPBQ9Y5S2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPBQ9Y5S2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPBQ9Y5S2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC38.79■■■■□ 3.8
CDC42BPBQ9Y5S2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC38.79■■■■□ 3.8
CDC42BPBQ9Y5S2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
CDC42BPBQ9Y5S2 REST-210ENST00000638187 1334 ntTSL 5 BASIC38.78■■■■□ 3.8
CDC42BPBQ9Y5S2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC38.78■■■■□ 3.8
CDC42BPBQ9Y5S2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC38.78■■■■□ 3.8
CDC42BPBQ9Y5S2 AL451085.2-201ENST00000605085 799 ntBASIC38.77■■■■□ 3.8
CDC42BPBQ9Y5S2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC38.77■■■■□ 3.8
CDC42BPBQ9Y5S2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
CDC42BPBQ9Y5S2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC38.77■■■■□ 3.8
CDC42BPBQ9Y5S2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC38.77■■■■□ 3.8
CDC42BPBQ9Y5S2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC38.75■■■■□ 3.79
CDC42BPBQ9Y5S2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC38.75■■■■□ 3.79
CDC42BPBQ9Y5S2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
CDC42BPBQ9Y5S2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC38.75■■■■□ 3.79
CDC42BPBQ9Y5S2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC38.74■■■■□ 3.79
CDC42BPBQ9Y5S2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
CDC42BPBQ9Y5S2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
CDC42BPBQ9Y5S2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC38.74■■■■□ 3.79
CDC42BPBQ9Y5S2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC38.74■■■■□ 3.79
CDC42BPBQ9Y5S2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC38.73■■■■□ 3.79
CDC42BPBQ9Y5S2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC38.73■■■■□ 3.79
CDC42BPBQ9Y5S2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
CDC42BPBQ9Y5S2 AC100797.4-201ENST00000631653 1827 ntBASIC38.72■■■■□ 3.79
CDC42BPBQ9Y5S2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC38.72■■■■□ 3.79
CDC42BPBQ9Y5S2 HES4-204ENST00000484667 667 ntTSL 3 BASIC38.72■■■■□ 3.79
CDC42BPBQ9Y5S2 AC133552.2-201ENST00000619106 1032 ntBASIC38.71■■■■□ 3.79
CDC42BPBQ9Y5S2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CDC42BPBQ9Y5S2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC38.7■■■■□ 3.79
CDC42BPBQ9Y5S2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC38.7■■■■□ 3.79
CDC42BPBQ9Y5S2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC38.69■■■■□ 3.78
CDC42BPBQ9Y5S2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC38.69■■■■□ 3.78
CDC42BPBQ9Y5S2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC38.69■■■■□ 3.78
CDC42BPBQ9Y5S2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC38.69■■■■□ 3.78
CDC42BPBQ9Y5S2 AP004833.2-201ENST00000532228 1454 ntBASIC38.69■■■■□ 3.78
CDC42BPBQ9Y5S2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
CDC42BPBQ9Y5S2 ST7-AS1-201ENST00000456775 1889 ntBASIC38.68■■■■□ 3.78
CDC42BPBQ9Y5S2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC38.68■■■■□ 3.78
CDC42BPBQ9Y5S2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC38.68■■■■□ 3.78
CDC42BPBQ9Y5S2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC38.67■■■■□ 3.78
CDC42BPBQ9Y5S2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
CDC42BPBQ9Y5S2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC38.66■■■■□ 3.78
CDC42BPBQ9Y5S2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC38.66■■■■□ 3.78
CDC42BPBQ9Y5S2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC38.65■■■■□ 3.78
CDC42BPBQ9Y5S2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
CDC42BPBQ9Y5S2 DUX4L9-201ENST00000449051 1259 ntBASIC38.65■■■■□ 3.78
CDC42BPBQ9Y5S2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC38.65■■■■□ 3.78
CDC42BPBQ9Y5S2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC38.65■■■■□ 3.78
CDC42BPBQ9Y5S2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CDC42BPBQ9Y5S2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
CDC42BPBQ9Y5S2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC38.63■■■■□ 3.78
CDC42BPBQ9Y5S2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
CDC42BPBQ9Y5S2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
CDC42BPBQ9Y5S2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
CDC42BPBQ9Y5S2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC38.62■■■■□ 3.77
CDC42BPBQ9Y5S2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC38.61■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms