Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB11Q9Y5F2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
PCDHB11Q9Y5F2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHB11Q9Y5F2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB11Q9Y5F2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB11Q9Y5F2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB11Q9Y5F2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHB11Q9Y5F2 RNF126P1-201ENST00000567452 1320 ntBASIC24.62■■□□□ 1.53
PCDHB11Q9Y5F2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB11Q9Y5F2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB11Q9Y5F2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB11Q9Y5F2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB11Q9Y5F2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB11Q9Y5F2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB11Q9Y5F2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PCDHB11Q9Y5F2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB11Q9Y5F2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB11Q9Y5F2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB11Q9Y5F2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB11Q9Y5F2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB11Q9Y5F2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB11Q9Y5F2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB11Q9Y5F2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB11Q9Y5F2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PCDHB11Q9Y5F2 AC110285.7-201ENST00000624417 1536 ntBASIC24.59■■□□□ 1.53
PCDHB11Q9Y5F2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB11Q9Y5F2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB11Q9Y5F2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB11Q9Y5F2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
PCDHB11Q9Y5F2 DRD5P2-201ENST00000421395 2012 ntBASIC24.57■■□□□ 1.52
PCDHB11Q9Y5F2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHB11Q9Y5F2 AC008813.1-201ENST00000536597 885 ntBASIC24.57■■□□□ 1.52
PCDHB11Q9Y5F2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB11Q9Y5F2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB11Q9Y5F2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDHB11Q9Y5F2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB11Q9Y5F2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB11Q9Y5F2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB11Q9Y5F2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB11Q9Y5F2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHB11Q9Y5F2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB11Q9Y5F2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PCDHB11Q9Y5F2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB11Q9Y5F2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PCDHB11Q9Y5F2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHB11Q9Y5F2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHB11Q9Y5F2 AC022413.1-201ENST00000624602 984 ntBASIC24.52■■□□□ 1.52
PCDHB11Q9Y5F2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB11Q9Y5F2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB11Q9Y5F2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB11Q9Y5F2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 AP002414.2-202ENST00000590929 1450 ntBASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB11Q9Y5F2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB11Q9Y5F2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB11Q9Y5F2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB11Q9Y5F2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB11Q9Y5F2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB11Q9Y5F2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB11Q9Y5F2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
PCDHB11Q9Y5F2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PCDHB11Q9Y5F2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHB11Q9Y5F2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDHB11Q9Y5F2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHB11Q9Y5F2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.48■■□□□ 1.51
PCDHB11Q9Y5F2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB11Q9Y5F2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHB11Q9Y5F2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB11Q9Y5F2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB11Q9Y5F2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB11Q9Y5F2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms