Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRIT1Q9P2V4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 AC092296.2-201ENST00000589470 999 ntBASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 AL139393.2-201ENST00000608721 2025 ntBASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.45■■□□□ 1.51
LRIT1Q9P2V4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.45■■□□□ 1.5
LRIT1Q9P2V4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LRIT1Q9P2V4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 ECEL1P2-201ENST00000461596 1295 ntBASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.43■■□□□ 1.5
LRIT1Q9P2V4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
LRIT1Q9P2V4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 ABCB10P3-201ENST00000561950 2166 ntBASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 AC012354.3-201ENST00000623734 483 ntBASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 U85056.1-201ENST00000616429 682 ntBASIC24.41■■□□□ 1.5
LRIT1Q9P2V4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRIT1Q9P2V4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LRIT1Q9P2V4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRIT1Q9P2V4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRIT1Q9P2V4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LRIT1Q9P2V4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 AL157400.5-201ENST00000507624 621 ntBASIC24.34■■□□□ 1.49
LRIT1Q9P2V4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.34■■□□□ 1.49
LRIT1Q9P2V4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.34■■□□□ 1.49
LRIT1Q9P2V4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LRIT1Q9P2V4 AL359258.2-201ENST00000564063 1566 ntBASIC24.33■■□□□ 1.48
LRIT1Q9P2V4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 AC018358.1-201ENST00000631079 1402 ntBASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
LRIT1Q9P2V4 AL033527.3-201ENST00000566366 1196 ntBASIC24.29■■□□□ 1.48
LRIT1Q9P2V4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms