Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.48■■□□□ 1.03
IFT46Q9NQC8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IFT46Q9NQC8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IFT46Q9NQC8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IFT46Q9NQC8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.46■■□□□ 1.03
IFT46Q9NQC8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
IFT46Q9NQC8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
IFT46Q9NQC8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
IFT46Q9NQC8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.45■■□□□ 1.02
IFT46Q9NQC8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT46Q9NQC8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT46Q9NQC8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.45■■□□□ 1.02
IFT46Q9NQC8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT46Q9NQC8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT46Q9NQC8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IFT46Q9NQC8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT46Q9NQC8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
IFT46Q9NQC8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IFT46Q9NQC8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
IFT46Q9NQC8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 AP002414.2-202ENST00000590929 1450 ntBASIC21.42■■□□□ 1.02
IFT46Q9NQC8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.42■■□□□ 1.02
IFT46Q9NQC8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IFT46Q9NQC8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IFT46Q9NQC8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IFT46Q9NQC8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFT46Q9NQC8 AC091060.1-201ENST00000623524 1766 ntBASIC21.39■■□□□ 1.01
IFT46Q9NQC8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IFT46Q9NQC8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IFT46Q9NQC8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IFT46Q9NQC8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
IFT46Q9NQC8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.38■■□□□ 1.01
IFT46Q9NQC8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
IFT46Q9NQC8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
IFT46Q9NQC8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.37■■□□□ 1.01
IFT46Q9NQC8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IFT46Q9NQC8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT46Q9NQC8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT46Q9NQC8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT46Q9NQC8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.35■■□□□ 1.01
IFT46Q9NQC8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.35■■□□□ 1.01
IFT46Q9NQC8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFT46Q9NQC8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFT46Q9NQC8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT46Q9NQC8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.33■■□□□ 1.01
IFT46Q9NQC8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
IFT46Q9NQC8 RARRES2P7-201ENST00000567349 469 ntBASIC21.31■■□□□ 1
IFT46Q9NQC8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.31■■□□□ 1
IFT46Q9NQC8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFT46Q9NQC8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFT46Q9NQC8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.3■■□□□ 1
IFT46Q9NQC8 SETD8P1-201ENST00000623146 1180 ntBASIC21.3■■□□□ 1
IFT46Q9NQC8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IFT46Q9NQC8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
IFT46Q9NQC8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IFT46Q9NQC8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.29■■□□□ 1
IFT46Q9NQC8 AC145676.1-201ENST00000514988 2004 ntBASIC21.29■■□□□ 1
IFT46Q9NQC8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.29■■□□□ 1
IFT46Q9NQC8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT46Q9NQC8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.29■■□□□ 1
IFT46Q9NQC8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT46Q9NQC8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IFT46Q9NQC8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms