Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.57■■□□□ 1.84
CALR3Q96L12 DUX4L28-201ENST00000623687 678 ntBASIC26.57■■□□□ 1.84
CALR3Q96L12 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.56■■□□□ 1.84
CALR3Q96L12 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.56■■□□□ 1.84
CALR3Q96L12 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.56■■□□□ 1.84
CALR3Q96L12 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CALR3Q96L12 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.56■■□□□ 1.84
CALR3Q96L12 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CALR3Q96L12 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CALR3Q96L12 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CALR3Q96L12 AC135731.1-201ENST00000569415 2548 ntBASIC26.55■■□□□ 1.84
CALR3Q96L12 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.55■■□□□ 1.84
CALR3Q96L12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CALR3Q96L12 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.55■■□□□ 1.84
CALR3Q96L12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CALR3Q96L12 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CALR3Q96L12 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.54■■□□□ 1.84
CALR3Q96L12 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CALR3Q96L12 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CALR3Q96L12 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.54■■□□□ 1.84
CALR3Q96L12 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CALR3Q96L12 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CALR3Q96L12 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CALR3Q96L12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CALR3Q96L12 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CALR3Q96L12 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CALR3Q96L12 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.52■■□□□ 1.84
CALR3Q96L12 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CALR3Q96L12 AP006261.1-201ENST00000584783 668 ntBASIC26.52■■□□□ 1.84
CALR3Q96L12 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
CALR3Q96L12 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CALR3Q96L12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.51■■□□□ 1.83
CALR3Q96L12 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CALR3Q96L12 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.5■■□□□ 1.83
CALR3Q96L12 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CALR3Q96L12 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
CALR3Q96L12 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CALR3Q96L12 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CALR3Q96L12 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
CALR3Q96L12 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CALR3Q96L12 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CALR3Q96L12 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CALR3Q96L12 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CALR3Q96L12 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CALR3Q96L12 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CALR3Q96L12 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.47■■□□□ 1.83
CALR3Q96L12 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CALR3Q96L12 AL449106.1-201ENST00000608517 1980 ntBASIC26.46■■□□□ 1.83
CALR3Q96L12 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CALR3Q96L12 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.45■■□□□ 1.83
CALR3Q96L12 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CALR3Q96L12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CALR3Q96L12 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CALR3Q96L12 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CALR3Q96L12 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CALR3Q96L12 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CALR3Q96L12 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.44■■□□□ 1.82
CALR3Q96L12 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CALR3Q96L12 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CALR3Q96L12 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CALR3Q96L12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CALR3Q96L12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CALR3Q96L12 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CALR3Q96L12 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CALR3Q96L12 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.42■■□□□ 1.82
CALR3Q96L12 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CALR3Q96L12 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CALR3Q96L12 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CALR3Q96L12 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.41■■□□□ 1.82
CALR3Q96L12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.41■■□□□ 1.82
CALR3Q96L12 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.41■■□□□ 1.82
CALR3Q96L12 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CALR3Q96L12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.41■■□□□ 1.82
CALR3Q96L12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CALR3Q96L12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.4■■□□□ 1.82
CALR3Q96L12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
CALR3Q96L12 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.39■■□□□ 1.82
CALR3Q96L12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CALR3Q96L12 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.39■■□□□ 1.82
CALR3Q96L12 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CALR3Q96L12 AC091060.1-201ENST00000623524 1766 ntBASIC26.38■■□□□ 1.81
CALR3Q96L12 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.38■■□□□ 1.81
CALR3Q96L12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CALR3Q96L12 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CALR3Q96L12 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CALR3Q96L12 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CALR3Q96L12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CALR3Q96L12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.37■■□□□ 1.81
CALR3Q96L12 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CALR3Q96L12 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CALR3Q96L12 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CALR3Q96L12 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CALR3Q96L12 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CALR3Q96L12 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CALR3Q96L12 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.34■■□□□ 1.81
CALR3Q96L12 AC145676.1-201ENST00000514988 2004 ntBASIC26.34■■□□□ 1.81
CALR3Q96L12 AC087741.3-201ENST00000624270 1347 ntBASIC26.34■■□□□ 1.81
CALR3Q96L12 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CALR3Q96L12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CALR3Q96L12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms