Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM11Q96F44 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM11Q96F44 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.62■■□□□ 1.85
TRIM11Q96F44 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM11Q96F44 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM11Q96F44 AC110285.7-201ENST00000624417 1536 ntBASIC26.61■■□□□ 1.85
TRIM11Q96F44 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
TRIM11Q96F44 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM11Q96F44 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM11Q96F44 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM11Q96F44 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.6■■□□□ 1.85
TRIM11Q96F44 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
TRIM11Q96F44 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM11Q96F44 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM11Q96F44 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM11Q96F44 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM11Q96F44 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM11Q96F44 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
TRIM11Q96F44 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM11Q96F44 RPS2P35-201ENST00000443417 897 ntBASIC26.55■■□□□ 1.84
TRIM11Q96F44 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM11Q96F44 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TRIM11Q96F44 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM11Q96F44 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TRIM11Q96F44 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM11Q96F44 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM11Q96F44 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM11Q96F44 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM11Q96F44 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
TRIM11Q96F44 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
TRIM11Q96F44 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
TRIM11Q96F44 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM11Q96F44 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM11Q96F44 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM11Q96F44 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM11Q96F44 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM11Q96F44 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM11Q96F44 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.53■■□□□ 1.84
TRIM11Q96F44 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM11Q96F44 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
TRIM11Q96F44 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.53■■□□□ 1.84
TRIM11Q96F44 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM11Q96F44 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.52■■□□□ 1.84
TRIM11Q96F44 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.51■■□□□ 1.83
TRIM11Q96F44 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM11Q96F44 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM11Q96F44 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM11Q96F44 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.5■■□□□ 1.83
TRIM11Q96F44 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM11Q96F44 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.5■■□□□ 1.83
TRIM11Q96F44 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM11Q96F44 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.49■■□□□ 1.83
TRIM11Q96F44 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM11Q96F44 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM11Q96F44 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM11Q96F44 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM11Q96F44 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.48■■□□□ 1.83
TRIM11Q96F44 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM11Q96F44 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TRIM11Q96F44 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM11Q96F44 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM11Q96F44 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM11Q96F44 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
TRIM11Q96F44 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM11Q96F44 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM11Q96F44 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM11Q96F44 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM11Q96F44 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM11Q96F44 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM11Q96F44 LINC01971-201ENST00000617888 1048 ntBASIC26.45■■□□□ 1.82
TRIM11Q96F44 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM11Q96F44 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM11Q96F44 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM11Q96F44 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
TRIM11Q96F44 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM11Q96F44 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM11Q96F44 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM11Q96F44 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM11Q96F44 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
TRIM11Q96F44 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM11Q96F44 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM11Q96F44 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM11Q96F44 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.41■■□□□ 1.82
TRIM11Q96F44 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
TRIM11Q96F44 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM11Q96F44 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM11Q96F44 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM11Q96F44 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM11Q96F44 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TRIM11Q96F44 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM11Q96F44 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM11Q96F44 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.39■■□□□ 1.81
TRIM11Q96F44 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM11Q96F44 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM11Q96F44 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
TRIM11Q96F44 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.38■■□□□ 1.81
TRIM11Q96F44 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
TRIM11Q96F44 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
TRIM11Q96F44 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM11Q96F44 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms