Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF183Q96D59 AC148477.6-201ENST00000623746 465 ntBASIC18.48■□□□□ 0.55
RNF183Q96D59 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF183Q96D59 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF183Q96D59 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF183Q96D59 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF183Q96D59 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF183Q96D59 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF183Q96D59 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF183Q96D59 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF183Q96D59 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF183Q96D59 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF183Q96D59 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF183Q96D59 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF183Q96D59 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF183Q96D59 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF183Q96D59 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF183Q96D59 GPX1-201ENST00000419349 1106 ntBASIC18.45■□□□□ 0.54
RNF183Q96D59 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF183Q96D59 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RNF183Q96D59 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF183Q96D59 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF183Q96D59 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF183Q96D59 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF183Q96D59 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF183Q96D59 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF183Q96D59 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF183Q96D59 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF183Q96D59 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF183Q96D59 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF183Q96D59 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF183Q96D59 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF183Q96D59 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
RNF183Q96D59 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF183Q96D59 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF183Q96D59 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RNF183Q96D59 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF183Q96D59 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF183Q96D59 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF183Q96D59 AL139393.2-201ENST00000608721 2025 ntBASIC18.41■□□□□ 0.54
RNF183Q96D59 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF183Q96D59 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF183Q96D59 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF183Q96D59 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNF183Q96D59 AC022413.1-201ENST00000624602 984 ntBASIC18.41■□□□□ 0.54
RNF183Q96D59 AC100797.4-201ENST00000631653 1827 ntBASIC18.41■□□□□ 0.54
RNF183Q96D59 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF183Q96D59 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF183Q96D59 MIR219A2-201ENST00000608502 1504 ntBASIC18.4■□□□□ 0.54
RNF183Q96D59 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF183Q96D59 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF183Q96D59 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.4■□□□□ 0.54
RNF183Q96D59 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF183Q96D59 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF183Q96D59 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF183Q96D59 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF183Q96D59 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF183Q96D59 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF183Q96D59 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF183Q96D59 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF183Q96D59 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF183Q96D59 RNF126P1-201ENST00000567452 1320 ntBASIC18.38■□□□□ 0.53
RNF183Q96D59 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF183Q96D59 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF183Q96D59 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF183Q96D59 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RNF183Q96D59 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF183Q96D59 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF183Q96D59 RARRES2P2-201ENST00000394842 485 ntBASIC18.37■□□□□ 0.53
RNF183Q96D59 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF183Q96D59 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF183Q96D59 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF183Q96D59 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF183Q96D59 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF183Q96D59 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF183Q96D59 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF183Q96D59 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF183Q96D59 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF183Q96D59 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF183Q96D59 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF183Q96D59 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF183Q96D59 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF183Q96D59 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF183Q96D59 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF183Q96D59 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF183Q96D59 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF183Q96D59 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF183Q96D59 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF183Q96D59 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF183Q96D59 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF183Q96D59 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF183Q96D59 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF183Q96D59 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RNF183Q96D59 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF183Q96D59 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF183Q96D59 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF183Q96D59 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF183Q96D59 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF183Q96D59 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF183Q96D59 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms