Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.3■■□□□ 1
CLDND2Q8NHS1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDND2Q8NHS1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDND2Q8NHS1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDND2Q8NHS1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.29■■□□□ 1
CLDND2Q8NHS1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.29■■□□□ 1
CLDND2Q8NHS1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDND2Q8NHS1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDND2Q8NHS1 RARRES2P2-201ENST00000394842 485 ntBASIC21.28■■□□□ 1
CLDND2Q8NHS1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDND2Q8NHS1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLDND2Q8NHS1 AC142086.6-201ENST00000621154 1765 ntBASIC21.28■■□□□ 1
CLDND2Q8NHS1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.27■■□□□ 1
CLDND2Q8NHS1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDND2Q8NHS1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CLDND2Q8NHS1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.27■■□□□ 1
CLDND2Q8NHS1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.27■■□□□ 1
CLDND2Q8NHS1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.27■■□□□ 1
CLDND2Q8NHS1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLDND2Q8NHS1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.27■□□□□ 0.99
CLDND2Q8NHS1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDND2Q8NHS1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDND2Q8NHS1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDND2Q8NHS1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDND2Q8NHS1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDND2Q8NHS1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CLDND2Q8NHS1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 AC022413.1-201ENST00000624602 984 ntBASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDND2Q8NHS1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDND2Q8NHS1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDND2Q8NHS1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDND2Q8NHS1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDND2Q8NHS1 RNF126P1-201ENST00000567452 1320 ntBASIC21.24■□□□□ 0.99
CLDND2Q8NHS1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.23■□□□□ 0.99
CLDND2Q8NHS1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDND2Q8NHS1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDND2Q8NHS1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CLDND2Q8NHS1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDND2Q8NHS1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLDND2Q8NHS1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDND2Q8NHS1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDND2Q8NHS1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDND2Q8NHS1 AC148477.6-201ENST00000623746 465 ntBASIC21.22■□□□□ 0.99
CLDND2Q8NHS1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLDND2Q8NHS1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDND2Q8NHS1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDND2Q8NHS1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDND2Q8NHS1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDND2Q8NHS1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CLDND2Q8NHS1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDND2Q8NHS1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.2■□□□□ 0.98
CLDND2Q8NHS1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDND2Q8NHS1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDND2Q8NHS1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLDND2Q8NHS1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDND2Q8NHS1 ABHD17AP5-201ENST00000580133 923 ntBASIC21.18■□□□□ 0.98
CLDND2Q8NHS1 AC135731.1-201ENST00000569415 2548 ntBASIC21.18■□□□□ 0.98
CLDND2Q8NHS1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 AP004833.2-201ENST00000532228 1454 ntBASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 MIR219A2-201ENST00000608502 1504 ntBASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLDND2Q8NHS1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLDND2Q8NHS1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDND2Q8NHS1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDND2Q8NHS1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.15■□□□□ 0.98
CLDND2Q8NHS1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDND2Q8NHS1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDND2Q8NHS1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDND2Q8NHS1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLDND2Q8NHS1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDND2Q8NHS1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDND2Q8NHS1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDND2Q8NHS1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms