Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RNF169Q8NCN4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.48■■□□□ 1.99
RNF169Q8NCN4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.48■■□□□ 1.99
RNF169Q8NCN4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
RNF169Q8NCN4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RNF169Q8NCN4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.48■■□□□ 1.99
RNF169Q8NCN4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RNF169Q8NCN4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RNF169Q8NCN4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RNF169Q8NCN4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.46■■□□□ 1.99
RNF169Q8NCN4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.46■■□□□ 1.99
RNF169Q8NCN4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.46■■□□□ 1.99
RNF169Q8NCN4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.46■■□□□ 1.99
RNF169Q8NCN4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.45■■□□□ 1.99
RNF169Q8NCN4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.45■■□□□ 1.98
RNF169Q8NCN4 AC126177.7-201ENST00000547904 679 ntBASIC27.45■■□□□ 1.98
RNF169Q8NCN4 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.45■■□□□ 1.98
RNF169Q8NCN4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RNF169Q8NCN4 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.45■■□□□ 1.98
RNF169Q8NCN4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
RNF169Q8NCN4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
RNF169Q8NCN4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF169Q8NCN4 AC012354.3-201ENST00000623734 483 ntBASIC27.44■■□□□ 1.98
RNF169Q8NCN4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF169Q8NCN4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF169Q8NCN4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.43■■□□□ 1.98
RNF169Q8NCN4 AC092296.2-201ENST00000589470 999 ntBASIC27.43■■□□□ 1.98
RNF169Q8NCN4 U85056.1-201ENST00000616429 682 ntBASIC27.43■■□□□ 1.98
RNF169Q8NCN4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
RNF169Q8NCN4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.41■■□□□ 1.98
RNF169Q8NCN4 AL139393.2-201ENST00000608721 2025 ntBASIC27.41■■□□□ 1.98
RNF169Q8NCN4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.41■■□□□ 1.98
RNF169Q8NCN4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RNF169Q8NCN4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.41■■□□□ 1.98
RNF169Q8NCN4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
RNF169Q8NCN4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.4■■□□□ 1.98
RNF169Q8NCN4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RNF169Q8NCN4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RNF169Q8NCN4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
RNF169Q8NCN4 ABCB10P3-201ENST00000561950 2166 ntBASIC27.39■■□□□ 1.97
RNF169Q8NCN4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
RNF169Q8NCN4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF169Q8NCN4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF169Q8NCN4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RNF169Q8NCN4 ECEL1P2-201ENST00000461596 1295 ntBASIC27.37■■□□□ 1.97
RNF169Q8NCN4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.37■■□□□ 1.97
RNF169Q8NCN4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.37■■□□□ 1.97
RNF169Q8NCN4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RNF169Q8NCN4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
RNF169Q8NCN4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.36■■□□□ 1.97
RNF169Q8NCN4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RNF169Q8NCN4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
RNF169Q8NCN4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
RNF169Q8NCN4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.36■■□□□ 1.97
RNF169Q8NCN4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.35■■□□□ 1.97
RNF169Q8NCN4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF169Q8NCN4 AL033527.3-201ENST00000566366 1196 ntBASIC27.35■■□□□ 1.97
RNF169Q8NCN4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.35■■□□□ 1.97
RNF169Q8NCN4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF169Q8NCN4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RNF169Q8NCN4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF169Q8NCN4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.97
RNF169Q8NCN4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF169Q8NCN4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF169Q8NCN4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF169Q8NCN4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF169Q8NCN4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.33■■□□□ 1.97
RNF169Q8NCN4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF169Q8NCN4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF169Q8NCN4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RNF169Q8NCN4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.32■■□□□ 1.96
RNF169Q8NCN4 AC018358.1-201ENST00000631079 1402 ntBASIC27.32■■□□□ 1.96
RNF169Q8NCN4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF169Q8NCN4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF169Q8NCN4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF169Q8NCN4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF169Q8NCN4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF169Q8NCN4 AL157400.5-201ENST00000507624 621 ntBASIC27.31■■□□□ 1.96
RNF169Q8NCN4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF169Q8NCN4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF169Q8NCN4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
RNF169Q8NCN4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
RNF169Q8NCN4 AL359258.2-201ENST00000564063 1566 ntBASIC27.3■■□□□ 1.96
RNF169Q8NCN4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
RNF169Q8NCN4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF169Q8NCN4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RNF169Q8NCN4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RNF169Q8NCN4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF169Q8NCN4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RNF169Q8NCN4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.28■■□□□ 1.96
RNF169Q8NCN4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RNF169Q8NCN4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
RNF169Q8NCN4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF169Q8NCN4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.27■■□□□ 1.96
RNF169Q8NCN4 KRT18P60-201ENST00000312876 1297 ntBASIC27.26■■□□□ 1.95
RNF169Q8NCN4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RNF169Q8NCN4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.26■■□□□ 1.95
RNF169Q8NCN4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
RNF169Q8NCN4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF169Q8NCN4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms