Protein–RNA interactions for Protein: Q8N8D9

C5orf56, Uncharacterized protein C5orf56, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56Q8N8D9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
C5orf56Q8N8D9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
C5orf56Q8N8D9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
C5orf56Q8N8D9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C5orf56Q8N8D9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C5orf56Q8N8D9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
C5orf56Q8N8D9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C5orf56Q8N8D9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.02■□□□□ 0.8
C5orf56Q8N8D9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
C5orf56Q8N8D9 MIR219A2-201ENST00000608502 1504 ntBASIC20.02■□□□□ 0.79
C5orf56Q8N8D9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C5orf56Q8N8D9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.01■□□□□ 0.79
C5orf56Q8N8D9 AC018358.1-201ENST00000631079 1402 ntBASIC20.01■□□□□ 0.79
C5orf56Q8N8D9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C5orf56Q8N8D9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C5orf56Q8N8D9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20■□□□□ 0.79
C5orf56Q8N8D9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
C5orf56Q8N8D9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
C5orf56Q8N8D9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20■□□□□ 0.79
C5orf56Q8N8D9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
C5orf56Q8N8D9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
C5orf56Q8N8D9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
C5orf56Q8N8D9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
C5orf56Q8N8D9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C5orf56Q8N8D9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.97■□□□□ 0.79
C5orf56Q8N8D9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C5orf56Q8N8D9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C5orf56Q8N8D9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
C5orf56Q8N8D9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.95■□□□□ 0.79
C5orf56Q8N8D9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C5orf56Q8N8D9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C5orf56Q8N8D9 AC142086.6-201ENST00000621154 1765 ntBASIC19.94■□□□□ 0.78
C5orf56Q8N8D9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.94■□□□□ 0.78
C5orf56Q8N8D9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C5orf56Q8N8D9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.94■□□□□ 0.78
C5orf56Q8N8D9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C5orf56Q8N8D9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C5orf56Q8N8D9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C5orf56Q8N8D9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
C5orf56Q8N8D9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
C5orf56Q8N8D9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.92■□□□□ 0.78
C5orf56Q8N8D9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C5orf56Q8N8D9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
C5orf56Q8N8D9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C5orf56Q8N8D9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
C5orf56Q8N8D9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C5orf56Q8N8D9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C5orf56Q8N8D9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
C5orf56Q8N8D9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C5orf56Q8N8D9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms