Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC116Q8IYX3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC116Q8IYX3 DUX4L11-201ENST00000611504 1267 ntBASIC23.69■■□□□ 1.38
CCDC116Q8IYX3 DUX4L12-201ENST00000614593 1267 ntBASIC23.69■■□□□ 1.38
CCDC116Q8IYX3 DUX4L14-201ENST00000621227 1267 ntBASIC23.69■■□□□ 1.38
CCDC116Q8IYX3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC116Q8IYX3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC116Q8IYX3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC116Q8IYX3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC116Q8IYX3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L13-201ENST00000554103 1267 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L15-201ENST00000611059 1267 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L23-201ENST00000615195 1269 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L24-201ENST00000617576 1269 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L22-201ENST00000618238 1269 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L20-201ENST00000619712 1269 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L21-201ENST00000622058 1269 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L10-201ENST00000622460 1267 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 DUX4L25-201ENST00000624915 1269 ntBASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC116Q8IYX3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC116Q8IYX3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC116Q8IYX3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC116Q8IYX3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC116Q8IYX3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC116Q8IYX3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC116Q8IYX3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCDC116Q8IYX3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC116Q8IYX3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC116Q8IYX3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC116Q8IYX3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC116Q8IYX3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC116Q8IYX3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC116Q8IYX3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC116Q8IYX3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CCDC116Q8IYX3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC116Q8IYX3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 AL121749.1-202ENST00000609313 2153 ntBASIC23.61■■□□□ 1.37
CCDC116Q8IYX3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.6■■□□□ 1.37
CCDC116Q8IYX3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.6■■□□□ 1.37
CCDC116Q8IYX3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC116Q8IYX3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC116Q8IYX3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CCDC116Q8IYX3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CCDC116Q8IYX3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCDC116Q8IYX3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCDC116Q8IYX3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC116Q8IYX3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC116Q8IYX3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC116Q8IYX3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CCDC116Q8IYX3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC116Q8IYX3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CCDC116Q8IYX3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC116Q8IYX3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC116Q8IYX3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CCDC116Q8IYX3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC116Q8IYX3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC116Q8IYX3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.52■■□□□ 1.36
CCDC116Q8IYX3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC116Q8IYX3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.52■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms