Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.98■■□□□ 1.91
DDX53Q86TM3 AL157400.5-201ENST00000507624 621 ntBASIC26.98■■□□□ 1.91
DDX53Q86TM3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX53Q86TM3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX53Q86TM3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.98■■□□□ 1.91
DDX53Q86TM3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.97■■□□□ 1.91
DDX53Q86TM3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
DDX53Q86TM3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
DDX53Q86TM3 TSPY13P-201ENST00000338964 914 ntBASIC26.97■■□□□ 1.91
DDX53Q86TM3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.97■■□□□ 1.91
DDX53Q86TM3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX53Q86TM3 AC004987.1-201ENST00000428627 508 ntBASIC26.96■■□□□ 1.91
DDX53Q86TM3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.96■■□□□ 1.91
DDX53Q86TM3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
DDX53Q86TM3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
DDX53Q86TM3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX53Q86TM3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX53Q86TM3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX53Q86TM3 AC100797.4-201ENST00000631653 1827 ntBASIC26.95■■□□□ 1.91
DDX53Q86TM3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
DDX53Q86TM3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
DDX53Q86TM3 ATP5G2P3-201ENST00000429083 425 ntBASIC26.95■■□□□ 1.9
DDX53Q86TM3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
DDX53Q86TM3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.94■■□□□ 1.9
DDX53Q86TM3 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.93■■□□□ 1.9
DDX53Q86TM3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.92■■□□□ 1.9
DDX53Q86TM3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX53Q86TM3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX53Q86TM3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.91■■□□□ 1.9
DDX53Q86TM3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
DDX53Q86TM3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX53Q86TM3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
DDX53Q86TM3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.9■■□□□ 1.9
DDX53Q86TM3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.9■■□□□ 1.9
DDX53Q86TM3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX53Q86TM3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
DDX53Q86TM3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX53Q86TM3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.9■■□□□ 1.9
DDX53Q86TM3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX53Q86TM3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.89■■□□□ 1.9
DDX53Q86TM3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX53Q86TM3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.89■■□□□ 1.9
DDX53Q86TM3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.89■■□□□ 1.9
DDX53Q86TM3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.89■■□□□ 1.9
DDX53Q86TM3 AC007029.1-201ENST00000604183 313 ntBASIC26.89■■□□□ 1.9
DDX53Q86TM3 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.89■■□□□ 1.89
DDX53Q86TM3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.88■■□□□ 1.89
DDX53Q86TM3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.88■■□□□ 1.89
DDX53Q86TM3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.88■■□□□ 1.89
DDX53Q86TM3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX53Q86TM3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.87■■□□□ 1.89
DDX53Q86TM3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX53Q86TM3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX53Q86TM3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
DDX53Q86TM3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
DDX53Q86TM3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
DDX53Q86TM3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX53Q86TM3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX53Q86TM3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX53Q86TM3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.86■■□□□ 1.89
DDX53Q86TM3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.86■■□□□ 1.89
DDX53Q86TM3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
DDX53Q86TM3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX53Q86TM3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX53Q86TM3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX53Q86TM3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX53Q86TM3 AL359258.2-201ENST00000564063 1566 ntBASIC26.84■■□□□ 1.89
DDX53Q86TM3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.84■■□□□ 1.89
DDX53Q86TM3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
DDX53Q86TM3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX53Q86TM3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
DDX53Q86TM3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.83■■□□□ 1.89
DDX53Q86TM3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX53Q86TM3 SMPD5-203ENST00000639008 1464 ntBASIC26.82■■□□□ 1.88
DDX53Q86TM3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX53Q86TM3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.82■■□□□ 1.88
DDX53Q86TM3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.81■■□□□ 1.88
DDX53Q86TM3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
DDX53Q86TM3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX53Q86TM3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.81■■□□□ 1.88
DDX53Q86TM3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX53Q86TM3 AC009831.1-201ENST00000580420 1582 ntBASIC26.8■■□□□ 1.88
DDX53Q86TM3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX53Q86TM3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX53Q86TM3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX53Q86TM3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
DDX53Q86TM3 AC133552.2-201ENST00000619106 1032 ntBASIC26.8■■□□□ 1.88
DDX53Q86TM3 AC129492.7-201ENST00000622992 756 ntBASIC26.8■■□□□ 1.88
DDX53Q86TM3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DDX53Q86TM3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.79■■□□□ 1.88
DDX53Q86TM3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX53Q86TM3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DDX53Q86TM3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX53Q86TM3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX53Q86TM3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DDX53Q86TM3 AL592293.1-201ENST00000502889 1188 ntBASIC26.77■■□□□ 1.88
DDX53Q86TM3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX53Q86TM3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
DDX53Q86TM3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.76■■□□□ 1.87
DDX53Q86TM3 AC025884.2-201ENST00000553429 711 ntBASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms