Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VPS13BQ7Z7G8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 AL592293.1-201ENST00000502889 1188 ntBASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VPS13BQ7Z7G8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 MIR219A2-201ENST00000608502 1504 ntBASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 AC110285.7-201ENST00000624417 1536 ntBASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS13BQ7Z7G8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS13BQ7Z7G8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VPS13BQ7Z7G8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS13BQ7Z7G8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.75■□□□□ 0.11
VPS13BQ7Z7G8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 AC009299.2-201ENST00000482477 511 ntBASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS13BQ7Z7G8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 ECEL1P2-201ENST00000461596 1295 ntBASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13BQ7Z7G8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 RP9P-202ENST00000450133 1212 ntBASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 DUX4L18-201ENST00000553347 1267 ntBASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13BQ7Z7G8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13BQ7Z7G8 AC009831.1-201ENST00000580420 1582 ntBASIC15.71■□□□□ 0.1
VPS13BQ7Z7G8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
VPS13BQ7Z7G8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 ST7-AS1-201ENST00000456775 1889 ntBASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
VPS13BQ7Z7G8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 THA1P-201ENST00000590384 1145 ntBASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13BQ7Z7G8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms