Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
MBD4O95243 MIR219A2-201ENST00000608502 1504 ntBASIC30.32■■■□□ 2.44
MBD4O95243 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
MBD4O95243 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
MBD4O95243 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.31■■■□□ 2.44
MBD4O95243 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
MBD4O95243 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MBD4O95243 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MBD4O95243 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
MBD4O95243 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.3■■■□□ 2.44
MBD4O95243 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MBD4O95243 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MBD4O95243 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
MBD4O95243 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MBD4O95243 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MBD4O95243 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
MBD4O95243 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
MBD4O95243 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
MBD4O95243 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.28■■■□□ 2.44
MBD4O95243 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MBD4O95243 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MBD4O95243 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MBD4O95243 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.28■■■□□ 2.44
MBD4O95243 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
MBD4O95243 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.28■■■□□ 2.44
MBD4O95243 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
MBD4O95243 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
MBD4O95243 DRD5P2-201ENST00000421395 2012 ntBASIC30.27■■■□□ 2.44
MBD4O95243 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
MBD4O95243 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MBD4O95243 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
MBD4O95243 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
MBD4O95243 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
MBD4O95243 HSD17B1P1-201ENST00000590052 955 ntBASIC30.25■■■□□ 2.43
MBD4O95243 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.25■■■□□ 2.43
MBD4O95243 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
MBD4O95243 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
MBD4O95243 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
MBD4O95243 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
MBD4O95243 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
MBD4O95243 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
MBD4O95243 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.24■■■□□ 2.43
MBD4O95243 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
MBD4O95243 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
MBD4O95243 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
MBD4O95243 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
MBD4O95243 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
MBD4O95243 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
MBD4O95243 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
MBD4O95243 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
MBD4O95243 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
MBD4O95243 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
MBD4O95243 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
MBD4O95243 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.19■■■□□ 2.42
MBD4O95243 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.18■■■□□ 2.42
MBD4O95243 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
MBD4O95243 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
MBD4O95243 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
MBD4O95243 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
MBD4O95243 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
MBD4O95243 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
MBD4O95243 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
MBD4O95243 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.17■■■□□ 2.42
MBD4O95243 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
MBD4O95243 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
MBD4O95243 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
MBD4O95243 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
MBD4O95243 GPX1-201ENST00000419349 1106 ntBASIC30.15■■■□□ 2.42
MBD4O95243 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
MBD4O95243 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.15■■■□□ 2.42
MBD4O95243 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.14■■■□□ 2.42
MBD4O95243 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.14■■■□□ 2.42
MBD4O95243 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
MBD4O95243 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.13■■■□□ 2.41
MBD4O95243 AC018358.1-201ENST00000631079 1402 ntBASIC30.13■■■□□ 2.41
MBD4O95243 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
MBD4O95243 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
MBD4O95243 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.12■■■□□ 2.41
MBD4O95243 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
MBD4O95243 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.12■■■□□ 2.41
MBD4O95243 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
MBD4O95243 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.12■■■□□ 2.41
MBD4O95243 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.11■■■□□ 2.41
MBD4O95243 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.11■■■□□ 2.41
MBD4O95243 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
MBD4O95243 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
MBD4O95243 AC022413.1-201ENST00000624602 984 ntBASIC30.1■■■□□ 2.41
MBD4O95243 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
MBD4O95243 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
MBD4O95243 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.09■■■□□ 2.41
MBD4O95243 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
MBD4O95243 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.08■■■□□ 2.41
MBD4O95243 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.08■■■□□ 2.41
MBD4O95243 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.08■■■□□ 2.41
MBD4O95243 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.08■■■□□ 2.41
MBD4O95243 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
MBD4O95243 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
MBD4O95243 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
MBD4O95243 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
MBD4O95243 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms