Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21■□□□□ 0.95
NDUFB3O43676 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NDUFB3O43676 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21■□□□□ 0.95
NDUFB3O43676 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21■□□□□ 0.95
NDUFB3O43676 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFB3O43676 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFB3O43676 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFB3O43676 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFB3O43676 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.98■□□□□ 0.95
NDUFB3O43676 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.98■□□□□ 0.95
NDUFB3O43676 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFB3O43676 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NDUFB3O43676 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFB3O43676 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NDUFB3O43676 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFB3O43676 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFB3O43676 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFB3O43676 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 AC142086.6-201ENST00000621154 1765 ntBASIC20.95■□□□□ 0.94
NDUFB3O43676 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NDUFB3O43676 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NDUFB3O43676 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
NDUFB3O43676 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFB3O43676 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFB3O43676 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NDUFB3O43676 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFB3O43676 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NDUFB3O43676 AC018358.1-201ENST00000631079 1402 ntBASIC20.93■□□□□ 0.94
NDUFB3O43676 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NDUFB3O43676 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NDUFB3O43676 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
NDUFB3O43676 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.92■□□□□ 0.94
NDUFB3O43676 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NDUFB3O43676 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFB3O43676 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFB3O43676 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.91■□□□□ 0.94
NDUFB3O43676 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.91■□□□□ 0.94
NDUFB3O43676 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
NDUFB3O43676 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
NDUFB3O43676 AC148477.6-201ENST00000623746 465 ntBASIC20.91■□□□□ 0.94
NDUFB3O43676 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.9■□□□□ 0.94
NDUFB3O43676 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.9■□□□□ 0.94
NDUFB3O43676 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFB3O43676 MIR4449-201ENST00000578365 66 ntBASIC20.89■□□□□ 0.93
NDUFB3O43676 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFB3O43676 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
NDUFB3O43676 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.88■□□□□ 0.93
NDUFB3O43676 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.88■□□□□ 0.93
NDUFB3O43676 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFB3O43676 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFB3O43676 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.87■□□□□ 0.93
NDUFB3O43676 MIR219A2-201ENST00000608502 1504 ntBASIC20.87■□□□□ 0.93
NDUFB3O43676 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NDUFB3O43676 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFB3O43676 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.86■□□□□ 0.93
NDUFB3O43676 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFB3O43676 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFB3O43676 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NDUFB3O43676 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NDUFB3O43676 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NDUFB3O43676 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFB3O43676 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.84■□□□□ 0.93
NDUFB3O43676 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.84■□□□□ 0.93
NDUFB3O43676 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NDUFB3O43676 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDUFB3O43676 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.83■□□□□ 0.92
NDUFB3O43676 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFB3O43676 LINC01003-201ENST00000564834 1764 ntBASIC20.82■□□□□ 0.92
NDUFB3O43676 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms