Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.87■■□□□ 1.73
SHISA7A6NL88 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHISA7A6NL88 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHISA7A6NL88 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.86■■□□□ 1.73
SHISA7A6NL88 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.86■■□□□ 1.73
SHISA7A6NL88 AL592293.1-201ENST00000502889 1188 ntBASIC25.86■■□□□ 1.73
SHISA7A6NL88 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHISA7A6NL88 AC126177.7-201ENST00000547904 679 ntBASIC25.86■■□□□ 1.73
SHISA7A6NL88 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.86■■□□□ 1.73
SHISA7A6NL88 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHISA7A6NL88 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHISA7A6NL88 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SHISA7A6NL88 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.84■■□□□ 1.73
SHISA7A6NL88 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.84■■□□□ 1.73
SHISA7A6NL88 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.84■■□□□ 1.73
SHISA7A6NL88 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SHISA7A6NL88 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHISA7A6NL88 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHISA7A6NL88 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.83■■□□□ 1.73
SHISA7A6NL88 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHISA7A6NL88 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHISA7A6NL88 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SHISA7A6NL88 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SHISA7A6NL88 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHISA7A6NL88 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SHISA7A6NL88 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHISA7A6NL88 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHISA7A6NL88 DUX4L18-201ENST00000553347 1267 ntBASIC25.82■■□□□ 1.72
SHISA7A6NL88 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHISA7A6NL88 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHISA7A6NL88 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.81■■□□□ 1.72
SHISA7A6NL88 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.81■■□□□ 1.72
SHISA7A6NL88 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.81■■□□□ 1.72
SHISA7A6NL88 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHISA7A6NL88 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SHISA7A6NL88 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHISA7A6NL88 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.8■■□□□ 1.72
SHISA7A6NL88 AC133552.2-201ENST00000619106 1032 ntBASIC25.8■■□□□ 1.72
SHISA7A6NL88 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHISA7A6NL88 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHISA7A6NL88 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.79■■□□□ 1.72
SHISA7A6NL88 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.79■■□□□ 1.72
SHISA7A6NL88 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.78■■□□□ 1.72
SHISA7A6NL88 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SHISA7A6NL88 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SHISA7A6NL88 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SHISA7A6NL88 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SHISA7A6NL88 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
SHISA7A6NL88 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
SHISA7A6NL88 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHISA7A6NL88 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHISA7A6NL88 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHISA7A6NL88 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.75■■□□□ 1.71
SHISA7A6NL88 AC026202.3-201ENST00000600805 1127 ntBASIC25.75■■□□□ 1.71
SHISA7A6NL88 AL451085.2-201ENST00000605085 799 ntBASIC25.75■■□□□ 1.71
SHISA7A6NL88 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHISA7A6NL88 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHISA7A6NL88 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHISA7A6NL88 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHISA7A6NL88 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.74■■□□□ 1.71
SHISA7A6NL88 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.74■■□□□ 1.71
SHISA7A6NL88 AL035685.1-201ENST00000636663 812 ntBASIC25.74■■□□□ 1.71
SHISA7A6NL88 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SHISA7A6NL88 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.73■■□□□ 1.71
SHISA7A6NL88 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.73■■□□□ 1.71
SHISA7A6NL88 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SHISA7A6NL88 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHISA7A6NL88 SMPD5-203ENST00000639008 1464 ntBASIC25.72■■□□□ 1.71
SHISA7A6NL88 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHISA7A6NL88 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHISA7A6NL88 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHISA7A6NL88 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.72■■□□□ 1.71
SHISA7A6NL88 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHISA7A6NL88 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SHISA7A6NL88 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.7■■□□□ 1.71
SHISA7A6NL88 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SHISA7A6NL88 AC025884.2-201ENST00000553429 711 ntBASIC25.7■■□□□ 1.7
SHISA7A6NL88 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.7■■□□□ 1.7
SHISA7A6NL88 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHISA7A6NL88 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHISA7A6NL88 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHISA7A6NL88 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHISA7A6NL88 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SHISA7A6NL88 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SHISA7A6NL88 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.68■■□□□ 1.7
SHISA7A6NL88 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SHISA7A6NL88 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHISA7A6NL88 AC100797.4-201ENST00000631653 1827 ntBASIC25.67■■□□□ 1.7
SHISA7A6NL88 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHISA7A6NL88 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHISA7A6NL88 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SHISA7A6NL88 AL359258.2-201ENST00000564063 1566 ntBASIC25.67■■□□□ 1.7
SHISA7A6NL88 AP004833.2-201ENST00000532228 1454 ntBASIC25.66■■□□□ 1.7
SHISA7A6NL88 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHISA7A6NL88 DUX4L9-201ENST00000449051 1259 ntBASIC25.66■■□□□ 1.7
SHISA7A6NL88 SPCS2P3-201ENST00000500401 656 ntBASIC25.66■■□□□ 1.7
SHISA7A6NL88 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHISA7A6NL88 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHISA7A6NL88 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SHISA7A6NL88 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms