Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 AC087741.3-201ENST00000624270 1347 ntBASIC17.73■□□□□ 0.43
TRBV10-1A0A0K0K1A3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV10-1A0A0K0K1A3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV10-1A0A0K0K1A3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV10-1A0A0K0K1A3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV10-1A0A0K0K1A3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV10-1A0A0K0K1A3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV10-1A0A0K0K1A3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRBV10-1A0A0K0K1A3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV10-1A0A0K0K1A3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV10-1A0A0K0K1A3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV10-1A0A0K0K1A3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TRBV10-1A0A0K0K1A3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV10-1A0A0K0K1A3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV10-1A0A0K0K1A3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV10-1A0A0K0K1A3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV10-1A0A0K0K1A3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV10-1A0A0K0K1A3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.69■□□□□ 0.42
TRBV10-1A0A0K0K1A3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV10-1A0A0K0K1A3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV10-1A0A0K0K1A3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV10-1A0A0K0K1A3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV10-1A0A0K0K1A3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV10-1A0A0K0K1A3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV10-1A0A0K0K1A3 AL162393.1-201ENST00000437852 946 ntBASIC17.67■□□□□ 0.42
TRBV10-1A0A0K0K1A3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV10-1A0A0K0K1A3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV10-1A0A0K0K1A3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV10-1A0A0K0K1A3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV10-1A0A0K0K1A3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV10-1A0A0K0K1A3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV10-1A0A0K0K1A3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV10-1A0A0K0K1A3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV10-1A0A0K0K1A3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV10-1A0A0K0K1A3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TRBV10-1A0A0K0K1A3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV10-1A0A0K0K1A3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.63■□□□□ 0.41
TRBV10-1A0A0K0K1A3 AC110285.7-201ENST00000624417 1536 ntBASIC17.62■□□□□ 0.41
TRBV10-1A0A0K0K1A3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV10-1A0A0K0K1A3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.62■□□□□ 0.41
TRBV10-1A0A0K0K1A3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV10-1A0A0K0K1A3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV10-1A0A0K0K1A3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV10-1A0A0K0K1A3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV10-1A0A0K0K1A3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRBV10-1A0A0K0K1A3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV10-1A0A0K0K1A3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV10-1A0A0K0K1A3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV10-1A0A0K0K1A3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV10-1A0A0K0K1A3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV10-1A0A0K0K1A3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV10-1A0A0K0K1A3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRBV10-1A0A0K0K1A3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRBV10-1A0A0K0K1A3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV10-1A0A0K0K1A3 DUX4L29-201ENST00000425409 679 ntBASIC17.58■□□□□ 0.4
TRBV10-1A0A0K0K1A3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV10-1A0A0K0K1A3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV10-1A0A0K0K1A3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV10-1A0A0K0K1A3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV10-1A0A0K0K1A3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms