Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.72■■■□□ 2.83
LOC102724428A0A0B4J2F2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.71■■■□□ 2.83
LOC102724428A0A0B4J2F2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.71■■■□□ 2.83
LOC102724428A0A0B4J2F2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.71■■■□□ 2.83
LOC102724428A0A0B4J2F2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
LOC102724428A0A0B4J2F2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.7■■■□□ 2.83
LOC102724428A0A0B4J2F2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
LOC102724428A0A0B4J2F2 AL592293.1-201ENST00000502889 1188 ntBASIC32.69■■■□□ 2.82
LOC102724428A0A0B4J2F2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
LOC102724428A0A0B4J2F2 AC009831.1-201ENST00000580420 1582 ntBASIC32.69■■■□□ 2.82
LOC102724428A0A0B4J2F2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.68■■■□□ 2.82
LOC102724428A0A0B4J2F2 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.68■■■□□ 2.82
LOC102724428A0A0B4J2F2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.68■■■□□ 2.82
LOC102724428A0A0B4J2F2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.68■■■□□ 2.82
LOC102724428A0A0B4J2F2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.67■■■□□ 2.82
LOC102724428A0A0B4J2F2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
LOC102724428A0A0B4J2F2 DUX4L18-201ENST00000553347 1267 ntBASIC32.67■■■□□ 2.82
LOC102724428A0A0B4J2F2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 AC133552.2-201ENST00000619106 1032 ntBASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
LOC102724428A0A0B4J2F2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
LOC102724428A0A0B4J2F2 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.65■■■□□ 2.82
LOC102724428A0A0B4J2F2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
LOC102724428A0A0B4J2F2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
LOC102724428A0A0B4J2F2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
LOC102724428A0A0B4J2F2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.64■■■□□ 2.82
LOC102724428A0A0B4J2F2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
LOC102724428A0A0B4J2F2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
LOC102724428A0A0B4J2F2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
LOC102724428A0A0B4J2F2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
LOC102724428A0A0B4J2F2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
LOC102724428A0A0B4J2F2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
LOC102724428A0A0B4J2F2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
LOC102724428A0A0B4J2F2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
LOC102724428A0A0B4J2F2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
LOC102724428A0A0B4J2F2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
LOC102724428A0A0B4J2F2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.6■■■□□ 2.81
LOC102724428A0A0B4J2F2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.6■■■□□ 2.81
LOC102724428A0A0B4J2F2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
LOC102724428A0A0B4J2F2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
LOC102724428A0A0B4J2F2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
LOC102724428A0A0B4J2F2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
LOC102724428A0A0B4J2F2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
LOC102724428A0A0B4J2F2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
LOC102724428A0A0B4J2F2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
LOC102724428A0A0B4J2F2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
LOC102724428A0A0B4J2F2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
LOC102724428A0A0B4J2F2 SMPD5-203ENST00000639008 1464 ntBASIC32.57■■■□□ 2.8
LOC102724428A0A0B4J2F2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
LOC102724428A0A0B4J2F2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
LOC102724428A0A0B4J2F2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
LOC102724428A0A0B4J2F2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.56■■■□□ 2.8
LOC102724428A0A0B4J2F2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.56■■■□□ 2.8
LOC102724428A0A0B4J2F2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
LOC102724428A0A0B4J2F2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
LOC102724428A0A0B4J2F2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
LOC102724428A0A0B4J2F2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
LOC102724428A0A0B4J2F2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
LOC102724428A0A0B4J2F2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.54■■■□□ 2.8
LOC102724428A0A0B4J2F2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
LOC102724428A0A0B4J2F2 AL035685.1-201ENST00000636663 812 ntBASIC32.54■■■□□ 2.8
LOC102724428A0A0B4J2F2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
LOC102724428A0A0B4J2F2 AC026202.3-201ENST00000600805 1127 ntBASIC32.53■■■□□ 2.8
LOC102724428A0A0B4J2F2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.52■■■□□ 2.8
LOC102724428A0A0B4J2F2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.52■■■□□ 2.8
LOC102724428A0A0B4J2F2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
LOC102724428A0A0B4J2F2 AL359258.2-201ENST00000564063 1566 ntBASIC32.51■■■□□ 2.79
LOC102724428A0A0B4J2F2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.51■■■□□ 2.79
LOC102724428A0A0B4J2F2 AL451085.2-201ENST00000605085 799 ntBASIC32.51■■■□□ 2.79
LOC102724428A0A0B4J2F2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
LOC102724428A0A0B4J2F2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
LOC102724428A0A0B4J2F2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.49■■■□□ 2.79
LOC102724428A0A0B4J2F2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.49■■■□□ 2.79
LOC102724428A0A0B4J2F2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
LOC102724428A0A0B4J2F2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
LOC102724428A0A0B4J2F2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
LOC102724428A0A0B4J2F2 AP004833.2-201ENST00000532228 1454 ntBASIC32.48■■■□□ 2.79
LOC102724428A0A0B4J2F2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
LOC102724428A0A0B4J2F2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LOC102724428A0A0B4J2F2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LOC102724428A0A0B4J2F2 AC025884.2-201ENST00000553429 711 ntBASIC32.47■■■□□ 2.79
LOC102724428A0A0B4J2F2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
LOC102724428A0A0B4J2F2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
LOC102724428A0A0B4J2F2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
LOC102724428A0A0B4J2F2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.46■■■□□ 2.79
LOC102724428A0A0B4J2F2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
LOC102724428A0A0B4J2F2 AC100797.4-201ENST00000631653 1827 ntBASIC32.45■■■□□ 2.79
LOC102724428A0A0B4J2F2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
LOC102724428A0A0B4J2F2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.45■■■□□ 2.78
LOC102724428A0A0B4J2F2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.44■■■□□ 2.78
LOC102724428A0A0B4J2F2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LOC102724428A0A0B4J2F2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.44■■■□□ 2.78
LOC102724428A0A0B4J2F2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
LOC102724428A0A0B4J2F2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LOC102724428A0A0B4J2F2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.44■■■□□ 2.78
LOC102724428A0A0B4J2F2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms