Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRAV34A0A0B4J273 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV34A0A0B4J273 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV34A0A0B4J273 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV34A0A0B4J273 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV34A0A0B4J273 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV34A0A0B4J273 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV34A0A0B4J273 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV34A0A0B4J273 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV34A0A0B4J273 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV34A0A0B4J273 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV34A0A0B4J273 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV34A0A0B4J273 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV34A0A0B4J273 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV34A0A0B4J273 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRAV34A0A0B4J273 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV34A0A0B4J273 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV34A0A0B4J273 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV34A0A0B4J273 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV34A0A0B4J273 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV34A0A0B4J273 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV34A0A0B4J273 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV34A0A0B4J273 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAV34A0A0B4J273 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV34A0A0B4J273 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV34A0A0B4J273 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV34A0A0B4J273 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV34A0A0B4J273 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV34A0A0B4J273 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV34A0A0B4J273 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRAV34A0A0B4J273 AP002414.2-202ENST00000590929 1450 ntBASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 AC020928.2-201ENST00000588717 2197 ntBASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV34A0A0B4J273 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV34A0A0B4J273 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV34A0A0B4J273 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV34A0A0B4J273 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV34A0A0B4J273 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV34A0A0B4J273 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV34A0A0B4J273 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRAV34A0A0B4J273 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TRAV34A0A0B4J273 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV34A0A0B4J273 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV34A0A0B4J273 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV34A0A0B4J273 AC145676.1-201ENST00000514988 2004 ntBASIC19.12■□□□□ 0.65
TRAV34A0A0B4J273 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV34A0A0B4J273 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV34A0A0B4J273 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAV34A0A0B4J273 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV34A0A0B4J273 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV34A0A0B4J273 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV34A0A0B4J273 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV34A0A0B4J273 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV34A0A0B4J273 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV34A0A0B4J273 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV34A0A0B4J273 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms