RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A MON2P48563 1636 aaPredicted RBP16.89■□□□□ 0.29
TGA1tA(UGC)A INO80P53115 1489 aa16.63■□□□□ 0.25
TGA1tA(UGC)A TY1B-DR4Q07793 1604 aa16.23■□□□□ 0.19
TGA1tA(UGC)A TCB3Q03640 1545 aaKnown RBP16.21■□□□□ 0.19
TGA1tA(UGC)A SWR1Q05471 1514 aa16.15■□□□□ 0.18
TGA1tA(UGC)A SGS1P35187 1447 aa16.09■□□□□ 0.17
TGA1tA(UGC)A DNA2P38859 1522 aa15.97■□□□□ 0.15
TGA1tA(UGC)A KOG1P38873 1557 aa15.79■□□□□ 0.12
TGA1tA(UGC)A HSL1P34244 1518 aa15.68■□□□□ 0.1
TGA1tA(UGC)A SPT6P23615 1451 aaKnown RBP15.59■□□□□ 0.09
TGA1tA(UGC)A SPA2P23201 1466 aaKnown RBP15.34■□□□□ 0.05
TGA1tA(UGC)A HIR3P47171 1648 aa15.33■□□□□ 0.04
TGA1tA(UGC)A THO2P53552 1597 aaKnown RBP15.11■□□□□ 0.01
TGA1tA(UGC)A BUD4P47136 1447 aa15.04■□□□□ -0
TGA1tA(UGC)A ECM5Q03214 1411 aa15.04■□□□□ -0
TGA1tA(UGC)A XRN1P22147 1528 aaKnown RBP15.02□□□□□ -0.01
TGA1tA(UGC)A SSN2P38931 1420 aa15.01□□□□□ -0.01
TGA1tA(UGC)A RSE1Q04693 1361 aaKnown RBP15.01□□□□□ -0.01
TGA1tA(UGC)A MDS3P53094 1487 aa14.91□□□□□ -0.02
TGA1tA(UGC)A PEP1P32319 1579 aa14.86□□□□□ -0.03
TGA1tA(UGC)A REV3P14284 1504 aa14.82□□□□□ -0.04
TGA1tA(UGC)A ATG2P53855 1592 aa14.81□□□□□ -0.04
TGA1tA(UGC)A SIN3P22579 1536 aa14.74□□□□□ -0.05
TGA1tA(UGC)A SSK2P53599 1579 aa14.6□□□□□ -0.07
TGA1tA(UGC)A ESP1Q03018 1630 aa14.48□□□□□ -0.09
TGA1tA(UGC)A TAF2P23255 1407 aa14.46□□□□□ -0.09
TGA1tA(UGC)A BPT1P14772 1559 aa14.43□□□□□ -0.1
TGA1tA(UGC)A SKI3P17883 1432 aaKnown RBP14.41□□□□□ -0.1
TGA1tA(UGC)A YPK9Q12697 1472 aa14.3□□□□□ -0.12
TGA1tA(UGC)A DRS1P32892 752 aaKnown RBP14.29□□□□□ -0.12
TGA1tA(UGC)A MYO2P19524 1574 aaKnown RBP14.29□□□□□ -0.12
TGA1tA(UGC)A SCC2Q04002 1493 aa14.25□□□□□ -0.13
TGA1tA(UGC)A YCF1P39109 1515 aaKnown RBP14.23□□□□□ -0.13
TGA1tA(UGC)A MTC1P47018 478 aaKnown RBP14.22□□□□□ -0.13
TGA1tA(UGC)A UFD4P33202 1483 aa14.21□□□□□ -0.13
TGA1tA(UGC)A RPO31P04051 1460 aa14.17□□□□□ -0.14
TGA1tA(UGC)A TY2B-LR1P0C2J3 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-FP0CX63 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-GR2P0CX64 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-CP25384 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-DR2Q03494 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY1B-DR1Q03855 1755 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-DR3Q07791 1770 aaKnown RBP14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-OR1Q12113 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-DR1Q12472 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY2B-OR2Q12501 1770 aa14.11□□□□□ -0.15
TGA1tA(UGC)A TY1B-BRQ12193 1756 aa14.02□□□□□ -0.16
TGA1tA(UGC)A TY1B-GR3Q12316 1755 aa14.02□□□□□ -0.16
TGA1tA(UGC)A TY1B-ORQ92393 1755 aa14.02□□□□□ -0.16
TGA1tA(UGC)A CDC25P04821 1589 aa14.01□□□□□ -0.17
TGA1tA(UGC)A CHD1P32657 1468 aa13.97□□□□□ -0.17
TGA1tA(UGC)A TY2B-BQ12491 1770 aa13.94□□□□□ -0.18
TGA1tA(UGC)A TY1B-DR3Q99231 1755 aa13.94□□□□□ -0.18
TGA1tA(UGC)A TOP2P06786 1428 aaKnown RBP13.93□□□□□ -0.18
TGA1tA(UGC)A POL1P13382 1468 aa13.93□□□□□ -0.18
TGA1tA(UGC)A DNF1P32660 1571 aa13.92□□□□□ -0.18
TGA1tA(UGC)A TY1B-HO13535 1793 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-DR5P0C2I2 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-DR6P0C2I3 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-LR2P0C2I5 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-LR3P0C2I6 1755 aaKnown RBP13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-PR1P0C2I9 1755 aaKnown RBP13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-PR2P0C2J0 1756 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-PR3P0C2J1 1755 aaKnown RBP13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-JR1P47098 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-ML2Q03434 1755 aaKnown RBP13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-ER1Q03612 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-ML1Q04711 1755 aaKnown RBP13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-GR2Q12269 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-OLQ12273 1755 aa13.91□□□□□ -0.18
TGA1tA(UGC)A TY1B-PLQ12414 1755 aaKnown RBP13.91□□□□□ -0.18
TGA1tA(UGC)A RKR1Q04781 1562 aa13.89□□□□□ -0.19
TGA1tA(UGC)A ESC1Q03661 1658 aaKnown RBP13.88□□□□□ -0.19
TGA1tA(UGC)A PAN1P32521 1480 aa13.84□□□□□ -0.19
TGA1tA(UGC)A RPA190P10964 1664 aaKnown RBP13.82□□□□□ -0.2
TGA1tA(UGC)A MET5P47169 1442 aa13.78□□□□□ -0.2
TGA1tA(UGC)A YOR1P53049 1477 aa13.78□□□□□ -0.2
TGA1tA(UGC)A SMC4Q12267 1418 aa13.75□□□□□ -0.21
TGA1tA(UGC)A STU1P38198 1513 aa13.74□□□□□ -0.21
TGA1tA(UGC)A MMS22Q06164 1454 aa13.74□□□□□ -0.21
TGA1tA(UGC)A TY1B-JR2P47100 1755 aaKnown RBP13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-ER2Q03619 1755 aa13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-MR1Q04214 1755 aa13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-MR2Q04670 1755 aaKnown RBP13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-LR1Q12088 1755 aaKnown RBP13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-NL1Q12112 1755 aa13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-GR1Q12141 1755 aa13.63□□□□□ -0.23
TGA1tA(UGC)A TY1B-BLQ12490 1755 aa13.63□□□□□ -0.23
TGA1tA(UGC)A SPP41P38904 1435 aa13.61□□□□□ -0.23
TGA1tA(UGC)A NTE1Q04958 1679 aa13.57□□□□□ -0.24
TGA1tA(UGC)A RQC2Q12532 1038 aaKnown RBP13.57□□□□□ -0.24
TGA1tA(UGC)A LTE1P07866 1435 aa13.56□□□□□ -0.24
TGA1tA(UGC)A TRM732Q03496 1420 aa13.56□□□□□ -0.24
TGA1tA(UGC)A VTH1P40438 1549 aa13.55□□□□□ -0.24
TGA1tA(UGC)A VTH2P40890 1549 aa13.55□□□□□ -0.24
TGA1tA(UGC)A YRF1-1P0CX20 1796 aa13.55□□□□□ -0.24
TGA1tA(UGC)A YRF1-5P0CX21 1796 aa13.55□□□□□ -0.24
TGA1tA(UGC)A YRF1-8P0CX22 1796 aa13.55□□□□□ -0.24
TGA1tA(UGC)A TSC11P40061 1430 aa13.53□□□□□ -0.24
TGA1tA(UGC)A RPO21P04050 1733 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms