RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C MON2P48563 1636 aaPredicted RBP6.58□□□□□ -1.36
ATG11YPR049C DRS1P32892 752 aaKnown RBP6.38□□□□□ -1.39
ATG11YPR049C MTC1P47018 478 aaKnown RBP6.07□□□□□ -1.44
ATG11YPR049C TY1B-DR4Q07793 1604 aa6.06□□□□□ -1.44
ATG11YPR049C SWR1Q05471 1514 aa6□□□□□ -1.45
ATG11YPR049C INO80P53115 1489 aa6□□□□□ -1.45
ATG11YPR049C KOG1P38873 1557 aa5.93□□□□□ -1.46
ATG11YPR049C DNA2P38859 1522 aa5.92□□□□□ -1.46
ATG11YPR049C TCB3Q03640 1545 aaKnown RBP5.8□□□□□ -1.48
ATG11YPR049C FAP1P53971 965 aa5.74□□□□□ -1.49
ATG11YPR049C THO2P53552 1597 aaKnown RBP5.59□□□□□ -1.52
ATG11YPR049C BFR2Q06631 534 aaKnown RBP5.58□□□□□ -1.52
ATG11YPR049C SPA2P23201 1466 aaKnown RBP5.56□□□□□ -1.52
ATG11YPR049C HSL1P34244 1518 aa5.53□□□□□ -1.52
ATG11YPR049C PEP1P32319 1579 aa5.5□□□□□ -1.53
ATG11YPR049C SSK2P53599 1579 aa5.43□□□□□ -1.54
ATG11YPR049C RSE1Q04693 1361 aaKnown RBP5.4□□□□□ -1.55
ATG11YPR049C SPT6P23615 1451 aaKnown RBP5.39□□□□□ -1.55
ATG11YPR049C HIR3P47171 1648 aa5.39□□□□□ -1.55
ATG11YPR049C ATG2P53855 1592 aa5.38□□□□□ -1.55
ATG11YPR049C MDS3P53094 1487 aa5.37□□□□□ -1.55
ATG11YPR049C REV3P14284 1504 aa5.37□□□□□ -1.55
ATG11YPR049C BUD4P47136 1447 aa5.3□□□□□ -1.56
ATG11YPR049C DIP2Q12220 943 aaPredicted RBP5.29□□□□□ -1.56
ATG11YPR049C SIN3P22579 1536 aa5.27□□□□□ -1.57
ATG11YPR049C PRY3P47033 881 aa5.25□□□□□ -1.57
ATG11YPR049C ISW2Q08773 1120 aa5.24□□□□□ -1.57
ATG11YPR049C MYO2P19524 1574 aaKnown RBP5.23□□□□□ -1.57
ATG11YPR049C SGS1P35187 1447 aa5.2□□□□□ -1.58
ATG11YPR049C BPT1P14772 1559 aa5.19□□□□□ -1.58
ATG11YPR049C ECM5Q03214 1411 aa5.19□□□□□ -1.58
ATG11YPR049C TY1B-BRQ12193 1756 aa5.18□□□□□ -1.58
ATG11YPR049C TY1B-GR3Q12316 1755 aa5.18□□□□□ -1.58
ATG11YPR049C TY1B-ORQ92393 1755 aa5.18□□□□□ -1.58
ATG11YPR049C BNI1P41832 1953 aa5.17□□□□□ -1.58
ATG11YPR049C YCF1P39109 1515 aaKnown RBP5.15□□□□□ -1.59
ATG11YPR049C IRC20Q06554 1556 aa5.14□□□□□ -1.59
ATG11YPR049C REB1P21538 810 aa5.14□□□□□ -1.59
ATG11YPR049C TY2B-LR1P0C2J3 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-FP0CX63 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-GR2P0CX64 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-CP25384 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-DR2Q03494 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY1B-DR1Q03855 1755 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-DR3Q07791 1770 aaKnown RBP5.12□□□□□ -1.59
ATG11YPR049C TY2B-OR1Q12113 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-DR1Q12472 1770 aa5.12□□□□□ -1.59
ATG11YPR049C TY2B-OR2Q12501 1770 aa5.12□□□□□ -1.59
ATG11YPR049C RPA190P10964 1664 aaKnown RBP5.1□□□□□ -1.59
ATG11YPR049C RPG1P38249 964 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C TY1B-HO13535 1793 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-DR5P0C2I2 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-DR6P0C2I3 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-LR2P0C2I5 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-LR3P0C2I6 1755 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C TY1B-PR1P0C2I9 1755 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C TY1B-PR2P0C2J0 1756 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-PR3P0C2J1 1755 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C TY1B-JR1P47098 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-ML2Q03434 1755 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C TY1B-ER1Q03612 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-ML1Q04711 1755 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C TY1B-GR2Q12269 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-OLQ12273 1755 aa5.09□□□□□ -1.59
ATG11YPR049C TY1B-PLQ12414 1755 aaKnown RBP5.09□□□□□ -1.59
ATG11YPR049C ESP1Q03018 1630 aa5.08□□□□□ -1.6
ATG11YPR049C CDC25P04821 1589 aa5.07□□□□□ -1.6
ATG11YPR049C ESC1Q03661 1658 aaKnown RBP5.05□□□□□ -1.6
ATG11YPR049C TY2B-BQ12491 1770 aa5.05□□□□□ -1.6
ATG11YPR049C MET5P47169 1442 aa5.04□□□□□ -1.6
ATG11YPR049C RPL17AP05740 184 aaKnown RBP5.03□□□□□ -1.6
ATG11YPR049C RPL17BP46990 184 aaKnown RBP5.03□□□□□ -1.6
ATG11YPR049C TY1B-DR3Q99231 1755 aa5.03□□□□□ -1.6
ATG11YPR049C AAD16Q02895 342 aa5.03□□□□□ -1.6
ATG11YPR049C RKR1Q04781 1562 aa5.02□□□□□ -1.61
ATG11YPR049C DNF1P32660 1571 aa5.02□□□□□ -1.61
ATG11YPR049C XRN1P22147 1528 aaKnown RBP5.01□□□□□ -1.61
ATG11YPR049C YRF1-1P0CX20 1796 aa4.99□□□□□ -1.61
ATG11YPR049C YRF1-5P0CX21 1796 aa4.99□□□□□ -1.61
ATG11YPR049C YRF1-8P0CX22 1796 aa4.99□□□□□ -1.61
ATG11YPR049C LTE1P07866 1435 aa4.97□□□□□ -1.61
ATG11YPR049C RPO31P04051 1460 aa4.95□□□□□ -1.62
ATG11YPR049C YPK9Q12697 1472 aa4.94□□□□□ -1.62
ATG11YPR049C DNF2Q12675 1612 aa4.94□□□□□ -1.62
ATG11YPR049C TY1B-JR2P47100 1755 aaKnown RBP4.94□□□□□ -1.62
ATG11YPR049C TY1B-ER2Q03619 1755 aa4.94□□□□□ -1.62
ATG11YPR049C TY1B-MR1Q04214 1755 aa4.94□□□□□ -1.62
ATG11YPR049C TY1B-MR2Q04670 1755 aaKnown RBP4.94□□□□□ -1.62
ATG11YPR049C TY1B-LR1Q12088 1755 aaKnown RBP4.94□□□□□ -1.62
ATG11YPR049C TY1B-NL1Q12112 1755 aa4.94□□□□□ -1.62
ATG11YPR049C TY1B-GR1Q12141 1755 aa4.94□□□□□ -1.62
ATG11YPR049C TY1B-BLQ12490 1755 aa4.94□□□□□ -1.62
ATG11YPR049C SCC2Q04002 1493 aa4.93□□□□□ -1.62
ATG11YPR049C TSR3Q12094 313 aaKnown RBP4.92□□□□□ -1.62
ATG11YPR049C NTE1Q04958 1679 aa4.91□□□□□ -1.62
ATG11YPR049C RPO21P04050 1733 aaKnown RBP4.89□□□□□ -1.63
ATG11YPR049C MRPL32P25348 183 aa4.87□□□□□ -1.63
ATG11YPR049C MIF2P35201 549 aa4.87□□□□□ -1.63
ATG11YPR049C YOR093CQ12275 1648 aa4.86□□□□□ -1.63
ATG11YPR049C CHD1P32657 1468 aa4.85□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms